BLASTX nr result

ID: Coptis21_contig00030609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030609
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266696.1| PREDICTED: uncharacterized protein LOC100244...    77   1e-12
ref|XP_002301221.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002327066.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002509903.1| conserved hypothetical protein [Ricinus comm...    70   1e-10
ref|XP_004154141.1| PREDICTED: uncharacterized protein LOC101206...    70   2e-10

>ref|XP_002266696.1| PREDICTED: uncharacterized protein LOC100244411 [Vitis vinifera]
          Length = 303

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/67 (62%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = +3

Query: 3   GLAFCMSPLVRASPNNHRKDVNLPTS-GFSGEISRKNVSGKCHLSTAASLCANRSRKLAD 179
           GLAFCMSPLVRASPN       +P   G  GEI    V  K +LSTAA+ CANRSRKLAD
Sbjct: 239 GLAFCMSPLVRASPNRQWNQKGMPPEIGLPGEI---RVQTKPNLSTAAAFCANRSRKLAD 295

Query: 180 FGRYNYN 200
           FGR+N+N
Sbjct: 296 FGRFNHN 302


>ref|XP_002301221.1| predicted protein [Populus trichocarpa] gi|222842947|gb|EEE80494.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/68 (61%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
 Frame = +3

Query: 3   GLAFCMSPLVRASP--NNHRKDVNLPTSGFSGEISRKNVSGKCHLSTAASLCANRSRKLA 176
           GLAFC+SPLVRASP  N ++K    P  G+SGE+       + HLSTAAS CANRSRKLA
Sbjct: 226 GLAFCLSPLVRASPKPNWNQKGGLPPELGYSGEV---RAPVRPHLSTAASFCANRSRKLA 282

Query: 177 DFGRYNYN 200
           DFGR N+N
Sbjct: 283 DFGRVNHN 290


>ref|XP_002327066.1| predicted protein [Populus trichocarpa] gi|222835381|gb|EEE73816.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 44/68 (64%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
 Frame = +3

Query: 3   GLAFCMSPLVRASPNNH--RKDVNLPTSGFSGEISRKNVSGKCHLSTAASLCANRSRKLA 176
           GL FC+SPLVRASPN +  +K    P  G SGE +R  V  K HLSTAAS CANRSRKLA
Sbjct: 230 GLTFCLSPLVRASPNRNWSQKGGLPPELGLSGE-TRAPV--KPHLSTAASFCANRSRKLA 286

Query: 177 DFGRYNYN 200
           DFGR N+N
Sbjct: 287 DFGRVNHN 294


>ref|XP_002509903.1| conserved hypothetical protein [Ricinus communis]
           gi|223549802|gb|EEF51290.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/70 (57%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
 Frame = +3

Query: 3   GLAFCMSPLVRASPNNHRKDVN----LPTSGFSGEISRKNVSGKCHLSTAASLCANRSRK 170
           GLAFC+SPLVRASPN H              FSGE+    V  K HLSTAAS CANRSRK
Sbjct: 234 GLAFCLSPLVRASPNRHWNQKGGGGLAADIRFSGEV---RVPAKPHLSTAASFCANRSRK 290

Query: 171 LADFGRYNYN 200
           L D GR  +N
Sbjct: 291 LCDLGRIKHN 300


>ref|XP_004154141.1| PREDICTED: uncharacterized protein LOC101206256 [Cucumis sativus]
           gi|449499030|ref|XP_004160701.1| PREDICTED:
           uncharacterized protein LOC101229830 [Cucumis sativus]
          Length = 335

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/67 (59%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
 Frame = +3

Query: 6   LAFCMSPLVRASPNN-HRKDVNLPTSG-FSGEISRKNVSGKCHLSTAASLCANRSRKLAD 179
           LAFC+SPLVRASPN+ H     LP    +SG++    V  K H+S AAS CANRSRKLAD
Sbjct: 271 LAFCLSPLVRASPNHRHWNQKGLPPEFVYSGDV---RVPNKPHISEAASFCANRSRKLAD 327

Query: 180 FGRYNYN 200
           FGR N N
Sbjct: 328 FGRVNAN 334


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