BLASTX nr result

ID: Coptis21_contig00030599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030599
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]    75   4e-25
ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261...    75   4e-25
dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]      72   5e-22
ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-21
ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|2...    67   3e-21

>emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]
          Length = 366

 Score = 75.5 bits (184), Expect(2) = 4e-25
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = -1

Query: 157 PPPAYPEGLFNCDACGHKGNGFCYHCSTCGLDLHILC 47
           P PAYPEGLFNCDACG +GNGF YHC  C +DLHILC
Sbjct: 89  PNPAYPEGLFNCDACGKQGNGFSYHCGVCNIDLHILC 125



 Score = 64.3 bits (155), Expect(2) = 4e-25
 Identities = 36/68 (52%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = -2

Query: 339 HPLELFNIQ-HETHNLVSCSGCKLRPSE*IYTGKTCNYVLHISCSEMQ*FVHHPADPNHA 163
           HPL+L N    +T  L SCSGCKL+ S  IY  K CNY LHISCS+M   + H     HA
Sbjct: 25  HPLQLSNHHPQQTLTLASCSGCKLKASGLIYDCKRCNYFLHISCSQMPQQITHSFHKAHA 84

Query: 162 LTLLQPTP 139
           L+LL P P
Sbjct: 85  LSLL-PNP 91


>ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261320 [Vitis vinifera]
          Length = 360

 Score = 75.5 bits (184), Expect(2) = 4e-25
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = -1

Query: 157 PPPAYPEGLFNCDACGHKGNGFCYHCSTCGLDLHILC 47
           P PAYPEGLFNCDACG +GNGF YHC  C +DLHILC
Sbjct: 83  PNPAYPEGLFNCDACGKQGNGFSYHCGVCNIDLHILC 119



 Score = 64.3 bits (155), Expect(2) = 4e-25
 Identities = 36/68 (52%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = -2

Query: 339 HPLELFNIQ-HETHNLVSCSGCKLRPSE*IYTGKTCNYVLHISCSEMQ*FVHHPADPNHA 163
           HPL+L N    +T  L SCSGCKL+ S  IY  K CNY LHISCS+M   + H     HA
Sbjct: 19  HPLQLSNHHPQQTLTLASCSGCKLKASGLIYDCKRCNYFLHISCSQMPQQITHSFHKAHA 78

Query: 162 LTLLQPTP 139
           L+LL P P
Sbjct: 79  LSLL-PNP 85


>dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]
          Length = 212

 Score = 71.6 bits (174), Expect(2) = 5e-22
 Identities = 27/37 (72%), Positives = 29/37 (78%)
 Frame = -1

Query: 157 PPPAYPEGLFNCDACGHKGNGFCYHCSTCGLDLHILC 47
           P P YP+G FNCDACG  G+GF YHC TCG DLHILC
Sbjct: 86  PKPIYPDGKFNCDACGENGDGFSYHCKTCGTDLHILC 122



 Score = 57.8 bits (138), Expect(2) = 5e-22
 Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
 Frame = -2

Query: 339 HPLELFNIQH-ETHNLVSCSGCKLRPSE*IYTGKTCNYVLHISCSEMQ*FVHHPADPNHA 163
           HPLEL   Q+  + +   CSGCK++    IYT K+CN+ LH  CS+M   + HP D  H 
Sbjct: 22  HPLELITNQNFASSSSQLCSGCKIQAIGSIYTCKSCNFFLHTECSQMPQQITHPFDKEHH 81

Query: 162 LTLLQPTP 139
            TLL P P
Sbjct: 82  FTLL-PKP 88


>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 64.7 bits (156), Expect(2) = 2e-21
 Identities = 32/62 (51%), Positives = 39/62 (62%)
 Frame = -2

Query: 339 HPLELFNIQHETHNLVSCSGCKLRPSE*IYTGKTCNYVLHISCSEMQ*FVHHPADPNHAL 160
           HPLEL N Q    N  SCS C L+PS  +Y+ K CN+ LHISC++M   + HP  P H L
Sbjct: 17  HPLELSNAQSLYMN--SCSACNLQPSGWMYSCKPCNFTLHISCTQMPTLITHPCHPIHPL 74

Query: 159 TL 154
           TL
Sbjct: 75  TL 76



 Score = 62.8 bits (151), Expect(2) = 2e-21
 Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
 Frame = -1

Query: 160 YPPPAYPEGLFNCDACGHKGNGFCYHCSTCGLDLHILCFY--ATLRHSPNP 14
           +  P YP G FNCD CG +GNGF YHC+TC  D+H++C     +L H  +P
Sbjct: 77  FSTPVYPGGSFNCDGCGLQGNGFNYHCTTCDFDVHMMCATNPLSLAHQSHP 127


>ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|222872676|gb|EEF09807.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 66.6 bits (161), Expect(2) = 3e-21
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = -2

Query: 339 HPLELFNIQ-HETHNLVSCSGCKLRPSE*IYTGKTCNYVLHISCSEMQ*FVHHPADPNHA 163
           HPL+L N Q  +T  L SCSGCKL+ S  IY    CNY LH+SCS+M   + HP   NH 
Sbjct: 19  HPLQLSNYQPQQTLCLASCSGCKLKISGWIYACTQCNYFLHVSCSQMPQQITHPYHQNHV 78

Query: 162 LTLL 151
           L+LL
Sbjct: 79  LSLL 82



 Score = 60.1 bits (144), Expect(2) = 3e-21
 Identities = 22/35 (62%), Positives = 25/35 (71%)
 Frame = -1

Query: 151 PAYPEGLFNCDACGHKGNGFCYHCSTCGLDLHILC 47
           P YP  LFNCDACG +GNGF YHC TC + +H  C
Sbjct: 85  PMYPGDLFNCDACGKQGNGFSYHCGTCNIYIHTTC 119


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