BLASTX nr result

ID: Coptis21_contig00030581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030581
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276086.2| PREDICTED: uncharacterized protein LOC100246...   108   9e-22
emb|CAN69469.1| hypothetical protein VITISV_042556 [Vitis vinifera]   108   9e-22
ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|2...   106   3e-21
ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|2...   102   6e-20
ref|XP_002521346.1| hypothetical protein RCOM_0653450 [Ricinus c...    94   2e-17

>ref|XP_002276086.2| PREDICTED: uncharacterized protein LOC100246362 [Vitis vinifera]
          Length = 403

 Score =  108 bits (269), Expect = 9e-22
 Identities = 83/206 (40%), Positives = 99/206 (48%), Gaps = 9/206 (4%)
 Frame = +1

Query: 1   EELVL---TMKKKQXXXXXXXXXXLKNKDEMNDDYRRACLIXXXXXXXXXXXXXXRRNSA 171
           EELVL   TM+KK            K +DE     RRA +I              RR S 
Sbjct: 42  EELVLYRETMRKKHSNCTVN-----KEEDEEMASLRRAIMIEKWMEKKVSEKVVVRRKSM 96

Query: 172 PDFTQNARSN-----IGFHXXXXXXXXXXXXXXXXXXXXXLYGSQRPKPIRTSLSAKPET 336
            DF + +R++     +                          G QRPKPIRTS S  PE 
Sbjct: 97  ADFERRSRNDRDSFFLNSTSSSSDSSSGGGFSSSEAESVRSSGFQRPKPIRTSTSVPPE- 155

Query: 337 FERVSHHEHRRSSNDYASERHMRHFQNDRSSIP-QKPKHEGSGFNKTKLKAMKIYGDLKK 513
                +H H    N            +DR+ I  QKPKHEG GF KTK +A+KIYGDLKK
Sbjct: 156 -----NHHHLMFEN-----------YHDRNYIASQKPKHEG-GFVKTKSRALKIYGDLKK 198

Query: 514 VRQPISPGGKLASFLNSLFTPGTTRK 591
           V+QPISPGG+LASFLNSLFT GT +K
Sbjct: 199 VKQPISPGGRLASFLNSLFTTGTAKK 224


>emb|CAN69469.1| hypothetical protein VITISV_042556 [Vitis vinifera]
          Length = 403

 Score =  108 bits (269), Expect = 9e-22
 Identities = 83/206 (40%), Positives = 99/206 (48%), Gaps = 9/206 (4%)
 Frame = +1

Query: 1   EELVL---TMKKKQXXXXXXXXXXLKNKDEMNDDYRRACLIXXXXXXXXXXXXXXRRNSA 171
           EELVL   TM+KK            K +DE     RRA +I              RR S 
Sbjct: 42  EELVLYRETMRKKHSNCTVN-----KEEDEEMASLRRAIMIEKWMEKKVSEKVVVRRKSM 96

Query: 172 PDFTQNARSN-----IGFHXXXXXXXXXXXXXXXXXXXXXLYGSQRPKPIRTSLSAKPET 336
            DF + +R++     +                          G QRPKPIRTS S  PE 
Sbjct: 97  ADFERRSRNDRDSFFLNSTSSSSDSSSGGGFSSSEAESVRSSGFQRPKPIRTSTSVPPE- 155

Query: 337 FERVSHHEHRRSSNDYASERHMRHFQNDRSSIP-QKPKHEGSGFNKTKLKAMKIYGDLKK 513
                +H H    N            +DR+ I  QKPKHEG GF KTK +A+KIYGDLKK
Sbjct: 156 -----NHHHLMFEN-----------YHDRNYIASQKPKHEG-GFVKTKSRALKIYGDLKK 198

Query: 514 VRQPISPGGKLASFLNSLFTPGTTRK 591
           V+QPISPGG+LASFLNSLFT GT +K
Sbjct: 199 VKQPISPGGRLASFLNSLFTTGTAKK 224


>ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|222841575|gb|EEE79122.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score =  106 bits (265), Expect = 3e-21
 Identities = 59/104 (56%), Positives = 69/104 (66%)
 Frame = +1

Query: 280 YGSQRPKPIRTSLSAKPETFERVSHHEHRRSSNDYASERHMRHFQNDRSSIPQKPKHEGS 459
           Y  QRPKPIRTS+SA+PE ++R   H           +  M H      +  QK KHEGS
Sbjct: 149 YTMQRPKPIRTSISARPEKYQRREDHH----------QIDMYHNHERNYAPNQKAKHEGS 198

Query: 460 GFNKTKLKAMKIYGDLKKVRQPISPGGKLASFLNSLFTPGTTRK 591
            F KTK KA+KIYGDLKKV+QPISPGG+LASFLNSLFT G  +K
Sbjct: 199 -FVKTKSKALKIYGDLKKVKQPISPGGRLASFLNSLFTAGNAKK 241


>ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|222846854|gb|EEE84401.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score =  102 bits (253), Expect = 6e-20
 Identities = 57/104 (54%), Positives = 68/104 (65%)
 Frame = +1

Query: 280 YGSQRPKPIRTSLSAKPETFERVSHHEHRRSSNDYASERHMRHFQNDRSSIPQKPKHEGS 459
           Y  +RPKPIRTS+SA+PE ++R   H           +  M H      +  QK KHEGS
Sbjct: 113 YTMERPKPIRTSISARPEKYQRREDHH----------QIDMYHNHERNYAPNQKVKHEGS 162

Query: 460 GFNKTKLKAMKIYGDLKKVRQPISPGGKLASFLNSLFTPGTTRK 591
            F KTK KA+KIYGDLKKV+QPISPG +LASFLNSLFT G  +K
Sbjct: 163 -FVKTKSKALKIYGDLKKVKQPISPGRRLASFLNSLFTTGNAKK 205


>ref|XP_002521346.1| hypothetical protein RCOM_0653450 [Ricinus communis]
           gi|223539424|gb|EEF41014.1| hypothetical protein
           RCOM_0653450 [Ricinus communis]
          Length = 426

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 54/104 (51%), Positives = 62/104 (59%)
 Frame = +1

Query: 280 YGSQRPKPIRTSLSAKPETFERVSHHEHRRSSNDYASERHMRHFQNDRSSIPQKPKHEGS 459
           Y  QRPKPIRTS SA+P     + +H H  +                    P    HEGS
Sbjct: 144 YTMQRPKPIRTSASARPVDELGMYNHHHPTTQK------------------PNNKHHEGS 185

Query: 460 GFNKTKLKAMKIYGDLKKVRQPISPGGKLASFLNSLFTPGTTRK 591
            F KTK KA+KIYGDLKKV+QPISPGG+LASFLNSLFT G  +K
Sbjct: 186 -FVKTKSKALKIYGDLKKVKQPISPGGRLASFLNSLFTAGNAKK 228


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