BLASTX nr result

ID: Coptis21_contig00030577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030577
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]    168   1e-39
ref|XP_003618090.1| ATPase WRNIP1 [Medicago truncatula] gi|35551...   152   8e-35
ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]   147   2e-33
ref|XP_004170546.1| PREDICTED: ATPase WRNIP1-like, partial [Cucu...   142   1e-31
ref|NP_173839.1| AAA-type ATPase-like protein [Arabidopsis thali...   141   2e-31

>ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]
          Length = 534

 Score =  168 bits (425), Expect = 1e-39
 Identities = 92/157 (58%), Positives = 113/157 (71%), Gaps = 10/157 (6%)
 Frame = +3

Query: 3   NPNPNPS---FQPKLNRFFSPQTQQKPLTPTINTNPELKLDLFPNP--KRTKLQQNPPHH 167
           NPN +PS   FQPKL+RFF    Q KP  P             P+P  KR +L+     H
Sbjct: 49  NPNSSPSPSPFQPKLDRFF--HFQSKPSNPPQIQKQHCDTPSLPSPPSKRLRLEAENSPH 106

Query: 168 EPLSERMRPRKADEIIGQDHILGKNAILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVSS 347
           +PLSERMRPR  D+++GQDH+L   ++LRS++D NRLPSI+LWGPPGTGKTSIAKAIV+S
Sbjct: 107 QPLSERMRPRTVDDVVGQDHLLSHKSLLRSAIDSNRLPSIILWGPPGTGKTSIAKAIVNS 166

Query: 348 ----STYKFVSLSAVTAGVKDVRDVVEEAKK-KINNN 443
               S+Y+FVSLSAVTAGVKDVRDVVEEA+K K++ N
Sbjct: 167 SSQPSSYRFVSLSAVTAGVKDVRDVVEEARKIKVSKN 203


>ref|XP_003618090.1| ATPase WRNIP1 [Medicago truncatula] gi|355519425|gb|AET01049.1|
           ATPase WRNIP1 [Medicago truncatula]
          Length = 551

 Score =  152 bits (384), Expect = 8e-35
 Identities = 84/159 (52%), Positives = 108/159 (67%), Gaps = 19/159 (11%)
 Frame = +3

Query: 9   NPNPSFQPKLNRFFSPQTQQKPLTPTINTN----PELKLDLFPNP--------KRTKLQQ 152
           +P+ +FQPKL+RFF  QT Q+P+           P  +  L P          K T ++Q
Sbjct: 51  SPSSAFQPKLDRFF--QTPQQPIQAEQQQQQTEEPNKRTKLSPTQQNKPSFFFKPTSMKQ 108

Query: 153 NPPHHEPLSERMRPRKADEIIGQDHILGKNAILRSSLDCNRLPSIVLWGPPGTGKTSIAK 332
            P  HEPL ER+RPR  DE++GQDH+L  N+ILRSS+   RLPSI+LWGPPGTGKT+IAK
Sbjct: 109 QPQTHEPLYERLRPRTLDEVVGQDHLLSTNSILRSSIQRKRLPSILLWGPPGTGKTTIAK 168

Query: 333 AIVSSST-------YKFVSLSAVTAGVKDVRDVVEEAKK 428
           AIV+SS+       Y+FVSLSAVT+GVKDVR+ V+EA+K
Sbjct: 169 AIVNSSSTTKDSPLYRFVSLSAVTSGVKDVREAVDEARK 207


>ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]
          Length = 513

 Score =  147 bits (372), Expect = 2e-33
 Identities = 87/146 (59%), Positives = 103/146 (70%), Gaps = 8/146 (5%)
 Frame = +3

Query: 51  SPQTQQKPLTPTINTNPEL--KLDLFPNPKRTKLQQNPPHHEPLSERMRPRKADEIIGQD 224
           S     KP  P I++NP L  KLD F +      Q  PP     SERMRPR  D+++GQD
Sbjct: 38  SSSPSPKPNLP-ISSNPNLQPKLDRFFH-----FQPRPPPPSA-SERMRPRTIDDVVGQD 90

Query: 225 HILGKNAILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVSSS-----TYKFVSLSAVTAG 389
           H+L KN+ILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIV S+     +++FVSLSAVT+G
Sbjct: 91  HLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQSFRFVSLSAVTSG 150

Query: 390 VKDVRDVVEEAKK-KINNNNHFLFIL 464
           VKDVRD VEEA+K +I NN   +  L
Sbjct: 151 VKDVRDAVEEARKIRIKNNKRTVLFL 176


>ref|XP_004170546.1| PREDICTED: ATPase WRNIP1-like, partial [Cucumis sativus]
          Length = 446

 Score =  142 bits (357), Expect = 1e-31
 Identities = 72/102 (70%), Positives = 85/102 (83%), Gaps = 6/102 (5%)
 Frame = +3

Query: 177 SERMRPRKADEIIGQDHILGKNAILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVSSS-- 350
           SERMRPR  D+++GQDH+L KN+ILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIV S+  
Sbjct: 1   SERMRPRTIDDVVGQDHLLAKNSILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSS 60

Query: 351 ---TYKFVSLSAVTAGVKDVRDVVEEAKK-KINNNNHFLFIL 464
              +++FVSLSAVT+GVKDVRD VEEA+K +I NN   +  L
Sbjct: 61  FSQSFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFL 102


>ref|NP_173839.1| AAA-type ATPase-like protein [Arabidopsis thaliana]
           gi|2829884|gb|AAC00592.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332192391|gb|AEE30512.1|
           AAA-type ATPase-like protein [Arabidopsis thaliana]
          Length = 525

 Score =  141 bits (355), Expect = 2e-31
 Identities = 77/155 (49%), Positives = 106/155 (68%), Gaps = 13/155 (8%)
 Frame = +3

Query: 3   NPNPNPSFQPKLNRFFSPQTQQKPLTPTINT------NPELKLDLFPNP--KRTKLQQNP 158
           +P    + QPKL+RF   +   K L P +        NP+ ++ +  +   KR KL  + 
Sbjct: 39  SPQSTATLQPKLDRFL--RLHPKALAPAMGDDSSKRPNPKTQIHVAADDSNKRHKLSSSS 96

Query: 159 PH-HEPLSERMRPRKADEIIGQDHILGKNAILRSSLDCNRLPSIVLWGPPGTGKTSIAKA 335
              H+PLSERMRPR  D+++GQDH+L  +++LRS+++ NRLPSIV WGPPGTGKTSIAK+
Sbjct: 97  HRQHQPLSERMRPRTLDDVVGQDHLLSPSSLLRSAVESNRLPSIVFWGPPGTGKTSIAKS 156

Query: 336 IVSS----STYKFVSLSAVTAGVKDVRDVVEEAKK 428
           +++S    S Y+FVSLSAVT+GVKDVRD VE AK+
Sbjct: 157 LINSSKDPSLYRFVSLSAVTSGVKDVRDAVESAKR 191


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