BLASTX nr result

ID: Coptis21_contig00030560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030560
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-05

>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 31/66 (46%), Positives = 44/66 (66%)
 Frame = +1

Query: 85  LAKELPHLQILSLRLFAEELQPIPLNVNKFCHLKELVVTIFLDVDFDLLSLIPILNASPC 264
           LAK+LP LQ LSL +  +E+ P+P    KF  LK+L + I+  +D DLL++I +LNASP 
Sbjct: 271 LAKDLPQLQFLSL-IVKDEVLPLPATSPKFISLKQLDLLIWPFIDSDLLTVIYLLNASPL 329

Query: 265 LQKFHL 282
           L+   L
Sbjct: 330 LEILQL 335


Top