BLASTX nr result

ID: Coptis21_contig00030558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030558
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324217.1| predicted protein [Populus trichocarpa] gi|2...    69   6e-17
ref|XP_002535138.1| conserved hypothetical protein [Ricinus comm...    87   6e-15
gb|EAY82739.1| hypothetical protein OsI_37948 [Oryza sativa Indi...    56   2e-08
emb|CBI33445.3| unnamed protein product [Vitis vinifera]               64   3e-08
emb|CBI31099.3| unnamed protein product [Vitis vinifera]               63   1e-07

>ref|XP_002324217.1| predicted protein [Populus trichocarpa] gi|222865651|gb|EEF02782.1|
           predicted protein [Populus trichocarpa]
          Length = 83

 Score = 68.9 bits (167), Expect(2) = 6e-17
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = +2

Query: 629 LCTYSLYDKQVNGAGAWRTERFIKPFLASTP*IGRGVLYK 748
           +CTYSLYDKQVNG  AWRT++FIKPFL  TP IGR VLYK
Sbjct: 44  VCTYSLYDKQVNGVSAWRTKQFIKPFLVVTPKIGREVLYK 83



 Score = 45.1 bits (105), Expect(2) = 6e-17
 Identities = 26/46 (56%), Positives = 28/46 (60%)
 Frame = +3

Query: 486 MTASNTEIERYTWSRLSRTAFRKKWPT*KKGRALSCFKPTILFIVV 623
           MTAS   I  + +  L      KKWPT KKGRALSCF  TIL IVV
Sbjct: 1   MTASKRNIHGHGYPGLCSG---KKWPTRKKGRALSCFNSTILLIVV 43


>ref|XP_002535138.1| conserved hypothetical protein [Ricinus communis]
           gi|223523943|gb|EEF27244.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 57

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 47/71 (66%), Positives = 47/71 (66%)
 Frame = +2

Query: 509 RKIYMVTVIPDCVPEKVAYLKERAGTLVFQAHYTIHSCGALCTYSLYDKQVNGAGAWRTE 688
           R IY V VIPDCVPEKVAYLK RA                    SLYDKQVNGAGAWRTE
Sbjct: 6   RNIYTVMVIPDCVPEKVAYLKGRA-------------------LSLYDKQVNGAGAWRTE 46

Query: 689 RFIKPFLASTP 721
           RFIKPFLASTP
Sbjct: 47  RFIKPFLASTP 57


>gb|EAY82739.1| hypothetical protein OsI_37948 [Oryza sativa Indica Group]
          Length = 985

 Score = 56.2 bits (134), Expect(2) = 2e-08
 Identities = 28/37 (75%), Positives = 30/37 (81%), Gaps = 2/37 (5%)
 Frame = +2

Query: 416 LICARQANFAFWEVKQWLKRTFRNDSIE--YRNRKIY 520
           LICARQAN AFWEVK+ LKRTFRNDSIE  Y +R  Y
Sbjct: 771 LICARQANLAFWEVKEGLKRTFRNDSIEDIYIHRNAY 807



 Score = 28.5 bits (62), Expect(2) = 2e-08
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +1

Query: 517 IHGHGYPGLRSGKSGLLERKGGHSRV 594
           IH + Y GLRSGKS LL+    H RV
Sbjct: 802 IHRNAYSGLRSGKSSLLDL---HDRV 824


>emb|CBI33445.3| unnamed protein product [Vitis vinifera]
          Length = 130

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 29/31 (93%), Positives = 29/31 (93%)
 Frame = -2

Query: 616 MNSIVGLKHESARPFFQVGHFFRNAVRDNRD 524
           MNSIVGLKHESARPFFQVGHF RN VRDNRD
Sbjct: 1   MNSIVGLKHESARPFFQVGHFIRNTVRDNRD 31


>emb|CBI31099.3| unnamed protein product [Vitis vinifera]
          Length = 385

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -2

Query: 85  GERWDRLYNRGSRCKLFLSIAGQMTTGS 2
           GERWDRLYNRGSRCKLFLSIAGQMTTGS
Sbjct: 267 GERWDRLYNRGSRCKLFLSIAGQMTTGS 294


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