BLASTX nr result
ID: Coptis21_contig00030558
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030558 (860 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002324217.1| predicted protein [Populus trichocarpa] gi|2... 69 6e-17 ref|XP_002535138.1| conserved hypothetical protein [Ricinus comm... 87 6e-15 gb|EAY82739.1| hypothetical protein OsI_37948 [Oryza sativa Indi... 56 2e-08 emb|CBI33445.3| unnamed protein product [Vitis vinifera] 64 3e-08 emb|CBI31099.3| unnamed protein product [Vitis vinifera] 63 1e-07 >ref|XP_002324217.1| predicted protein [Populus trichocarpa] gi|222865651|gb|EEF02782.1| predicted protein [Populus trichocarpa] Length = 83 Score = 68.9 bits (167), Expect(2) = 6e-17 Identities = 31/40 (77%), Positives = 34/40 (85%) Frame = +2 Query: 629 LCTYSLYDKQVNGAGAWRTERFIKPFLASTP*IGRGVLYK 748 +CTYSLYDKQVNG AWRT++FIKPFL TP IGR VLYK Sbjct: 44 VCTYSLYDKQVNGVSAWRTKQFIKPFLVVTPKIGREVLYK 83 Score = 45.1 bits (105), Expect(2) = 6e-17 Identities = 26/46 (56%), Positives = 28/46 (60%) Frame = +3 Query: 486 MTASNTEIERYTWSRLSRTAFRKKWPT*KKGRALSCFKPTILFIVV 623 MTAS I + + L KKWPT KKGRALSCF TIL IVV Sbjct: 1 MTASKRNIHGHGYPGLCSG---KKWPTRKKGRALSCFNSTILLIVV 43 >ref|XP_002535138.1| conserved hypothetical protein [Ricinus communis] gi|223523943|gb|EEF27244.1| conserved hypothetical protein [Ricinus communis] Length = 57 Score = 86.7 bits (213), Expect = 6e-15 Identities = 47/71 (66%), Positives = 47/71 (66%) Frame = +2 Query: 509 RKIYMVTVIPDCVPEKVAYLKERAGTLVFQAHYTIHSCGALCTYSLYDKQVNGAGAWRTE 688 R IY V VIPDCVPEKVAYLK RA SLYDKQVNGAGAWRTE Sbjct: 6 RNIYTVMVIPDCVPEKVAYLKGRA-------------------LSLYDKQVNGAGAWRTE 46 Query: 689 RFIKPFLASTP 721 RFIKPFLASTP Sbjct: 47 RFIKPFLASTP 57 >gb|EAY82739.1| hypothetical protein OsI_37948 [Oryza sativa Indica Group] Length = 985 Score = 56.2 bits (134), Expect(2) = 2e-08 Identities = 28/37 (75%), Positives = 30/37 (81%), Gaps = 2/37 (5%) Frame = +2 Query: 416 LICARQANFAFWEVKQWLKRTFRNDSIE--YRNRKIY 520 LICARQAN AFWEVK+ LKRTFRNDSIE Y +R Y Sbjct: 771 LICARQANLAFWEVKEGLKRTFRNDSIEDIYIHRNAY 807 Score = 28.5 bits (62), Expect(2) = 2e-08 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +1 Query: 517 IHGHGYPGLRSGKSGLLERKGGHSRV 594 IH + Y GLRSGKS LL+ H RV Sbjct: 802 IHRNAYSGLRSGKSSLLDL---HDRV 824 >emb|CBI33445.3| unnamed protein product [Vitis vinifera] Length = 130 Score = 64.3 bits (155), Expect = 3e-08 Identities = 29/31 (93%), Positives = 29/31 (93%) Frame = -2 Query: 616 MNSIVGLKHESARPFFQVGHFFRNAVRDNRD 524 MNSIVGLKHESARPFFQVGHF RN VRDNRD Sbjct: 1 MNSIVGLKHESARPFFQVGHFIRNTVRDNRD 31 >emb|CBI31099.3| unnamed protein product [Vitis vinifera] Length = 385 Score = 62.8 bits (151), Expect = 1e-07 Identities = 28/28 (100%), Positives = 28/28 (100%) Frame = -2 Query: 85 GERWDRLYNRGSRCKLFLSIAGQMTTGS 2 GERWDRLYNRGSRCKLFLSIAGQMTTGS Sbjct: 267 GERWDRLYNRGSRCKLFLSIAGQMTTGS 294