BLASTX nr result
ID: Coptis21_contig00030540
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030540 (648 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subun... 360 1e-97 ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arab... 335 3e-90 ref|XP_004148649.1| PREDICTED: chromatin assembly factor 1 subun... 332 3e-89 ref|NP_974991.1| transducin/WD40 domain-containing protein [Arab... 332 3e-89 ref|NP_568990.1| transducin/WD40 domain-containing protein [Arab... 332 3e-89 >ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subunit B [Vitis vinifera] gi|296088566|emb|CBI37557.3| unnamed protein product [Vitis vinifera] Length = 456 Score = 360 bits (925), Expect = 1e-97 Identities = 171/209 (81%), Positives = 188/209 (89%) Frame = +1 Query: 22 MKGGTVQINWHDTKPVLTLDFHPKSGLLATGGADYDIKMWLINQCEVQKKAPTATYQTSL 201 M+GGTVQINWHDTKP+LTLDFHP SG LATGGADYDIK+WLIN EVQK+ PT +YQTSL Sbjct: 1 MRGGTVQINWHDTKPILTLDFHPLSGTLATGGADYDIKLWLINSGEVQKEVPTVSYQTSL 60 Query: 202 SYHGSAVNVLRFAPSGELLASGADGGELLLWKLHFTDTGHSWKVLKTLSFHRKDVLDMQW 381 SYHGSAVN+LRF+P+GE LASGADGGEL++WKLH TDTG SWKVLKTLSFHRKDVLD+QW Sbjct: 61 SYHGSAVNILRFSPTGEQLASGADGGELIIWKLHSTDTGPSWKVLKTLSFHRKDVLDLQW 120 Query: 382 STDGAYLVSGSVDNSCIIWDAIKGSVHQILDGHLHYVQGVAWDPLDRYVASLSSDRSCRI 561 STDGA+L+SGSVDNSCIIWD KGSVHQILD HLHYVQGVAWDP +YVASLSSDRSCRI Sbjct: 121 STDGAFLISGSVDNSCIIWDVNKGSVHQILDAHLHYVQGVAWDPQSKYVASLSSDRSCRI 180 Query: 562 YVNKPQKTKSKGPKVMNYVPTSVITKAEQ 648 YVNKPQ K+KG + MNYV VITK+EQ Sbjct: 181 YVNKPQ-NKTKGIEKMNYVCQHVITKSEQ 208 >ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arabidopsis lyrata subsp. lyrata] gi|297310746|gb|EFH41170.1| hypothetical protein ARALYDRAFT_496675 [Arabidopsis lyrata subsp. lyrata] Length = 489 Score = 335 bits (860), Expect = 3e-90 Identities = 158/209 (75%), Positives = 181/209 (86%) Frame = +1 Query: 22 MKGGTVQINWHDTKPVLTLDFHPKSGLLATGGADYDIKMWLINQCEVQKKAPTATYQTSL 201 MKGGT+QI+WHD KPVLTLDFHP SGLLAT GADYDIK+WLIN + +KK P+ +YQ+SL Sbjct: 1 MKGGTIQISWHDGKPVLTLDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSL 60 Query: 202 SYHGSAVNVLRFAPSGELLASGADGGELLLWKLHFTDTGHSWKVLKTLSFHRKDVLDMQW 381 +YHG AVN +RF+PSGELLASGADGGEL +WKLH ++T SWKV K+LSFHRKDVLD+QW Sbjct: 61 TYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQW 120 Query: 382 STDGAYLVSGSVDNSCIIWDAIKGSVHQILDGHLHYVQGVAWDPLDRYVASLSSDRSCRI 561 S D AYL+SGSVDNSCIIWD KG+VHQILD H HYVQGVAWDPL +YVASLSSDR+CRI Sbjct: 121 SLDDAYLISGSVDNSCIIWDVSKGTVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRI 180 Query: 562 YVNKPQKTKSKGPKVMNYVPTSVITKAEQ 648 YVNKPQ TKSKG + +NYV VITKA+Q Sbjct: 181 YVNKPQ-TKSKGVEKLNYVCQHVITKADQ 208 >ref|XP_004148649.1| PREDICTED: chromatin assembly factor 1 subunit FAS2-like [Cucumis sativus] gi|449530800|ref|XP_004172380.1| PREDICTED: chromatin assembly factor 1 subunit FAS2-like [Cucumis sativus] Length = 477 Score = 332 bits (852), Expect = 3e-89 Identities = 162/208 (77%), Positives = 177/208 (85%) Frame = +1 Query: 22 MKGGTVQINWHDTKPVLTLDFHPKSGLLATGGADYDIKMWLINQCEVQKKAPTATYQTSL 201 MKGGT+QI+WHD+KPVLTLDFHP SGLLATGGAD+DIK+WL+N E QKK P ATYQTSL Sbjct: 1 MKGGTLQISWHDSKPVLTLDFHPISGLLATGGADFDIKLWLLNSGEEQKKVPGATYQTSL 60 Query: 202 SYHGSAVNVLRFAPSGELLASGADGGELLLWKLHFTDTGHSWKVLKTLSFHRKDVLDMQW 381 SYHGSAVN LRF+PSGE LASGADGGEL++WKLH ++G SWKVLKTLSFHRKDVLD+QW Sbjct: 61 SYHGSAVNSLRFSPSGEQLASGADGGELIIWKLHHVESGQSWKVLKTLSFHRKDVLDLQW 120 Query: 382 STDGAYLVSGSVDNSCIIWDAIKGSVHQILDGHLHYVQGVAWDPLDRYVASLSSDRSCRI 561 S DGAYL+SGSVDNSCIIWD KGSV QILD HLHYVQGVA DPL +Y ASLSSDRSCRI Sbjct: 121 SHDGAYLISGSVDNSCIIWDVSKGSVQQILDAHLHYVQGVALDPLGKYAASLSSDRSCRI 180 Query: 562 YVNKPQKTKSKGPKVMNYVPTSVITKAE 645 Y KP TK K + M YV VITKAE Sbjct: 181 YAYKP-PTKVKNSEKMTYVCQHVITKAE 207 >ref|NP_974991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gi|75337830|sp|Q9SXY1.1|FAS2_ARATH RecName: Full=Chromatin assembly factor 1 subunit FAS2; Short=CAF-1 subunit FAS2; AltName: Full=CAF-1 p60 homolog; AltName: Full=Protein FASCIATA 2 gi|4884488|dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] gi|10178066|dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gi|332010547|gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] Length = 487 Score = 332 bits (852), Expect = 3e-89 Identities = 157/209 (75%), Positives = 179/209 (85%) Frame = +1 Query: 22 MKGGTVQINWHDTKPVLTLDFHPKSGLLATGGADYDIKMWLINQCEVQKKAPTATYQTSL 201 MKGGT+QI+WHD KPVLT+DFHP SGLLAT GADYDIK+WLIN + +KK P+ +YQ+SL Sbjct: 1 MKGGTIQISWHDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSL 60 Query: 202 SYHGSAVNVLRFAPSGELLASGADGGELLLWKLHFTDTGHSWKVLKTLSFHRKDVLDMQW 381 +YHG AVN +RF+PSGELLASGADGGEL +WKLH ++T SWKV K+LSFHRKDVLD+QW Sbjct: 61 TYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQW 120 Query: 382 STDGAYLVSGSVDNSCIIWDAIKGSVHQILDGHLHYVQGVAWDPLDRYVASLSSDRSCRI 561 S D AYL+SGSVDNSCIIWD KGSVHQILD H HYVQGVAWDPL +YVASLSSDR+CRI Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRI 180 Query: 562 YVNKPQKTKSKGPKVMNYVPTSVITKAEQ 648 Y NKPQ TKSKG + MNYV VI KA+Q Sbjct: 181 YANKPQ-TKSKGVEKMNYVCQHVIMKADQ 208 >ref|NP_568990.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gi|14030689|gb|AAK53019.1|AF375435_1 AT5g64630/MUB3_15 [Arabidopsis thaliana] gi|18491113|gb|AAL69523.1| AT5g64630/MUB3_15 [Arabidopsis thaliana] gi|332010546|gb|AED97929.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] Length = 397 Score = 332 bits (852), Expect = 3e-89 Identities = 157/209 (75%), Positives = 179/209 (85%) Frame = +1 Query: 22 MKGGTVQINWHDTKPVLTLDFHPKSGLLATGGADYDIKMWLINQCEVQKKAPTATYQTSL 201 MKGGT+QI+WHD KPVLT+DFHP SGLLAT GADYDIK+WLIN + +KK P+ +YQ+SL Sbjct: 1 MKGGTIQISWHDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSL 60 Query: 202 SYHGSAVNVLRFAPSGELLASGADGGELLLWKLHFTDTGHSWKVLKTLSFHRKDVLDMQW 381 +YHG AVN +RF+PSGELLASGADGGEL +WKLH ++T SWKV K+LSFHRKDVLD+QW Sbjct: 61 TYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQW 120 Query: 382 STDGAYLVSGSVDNSCIIWDAIKGSVHQILDGHLHYVQGVAWDPLDRYVASLSSDRSCRI 561 S D AYL+SGSVDNSCIIWD KGSVHQILD H HYVQGVAWDPL +YVASLSSDR+CRI Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRI 180 Query: 562 YVNKPQKTKSKGPKVMNYVPTSVITKAEQ 648 Y NKPQ TKSKG + MNYV VI KA+Q Sbjct: 181 YANKPQ-TKSKGVEKMNYVCQHVIMKADQ 208