BLASTX nr result

ID: Coptis21_contig00030535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030535
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35383.1| unknown [Lotus japonicus]                               68   9e-10
ref|XP_003541981.1| PREDICTED: uncharacterized protein LOC100806...    67   2e-09
ref|XP_002313539.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003539436.1| PREDICTED: uncharacterized protein LOC100799...    64   2e-08
gb|ACU23190.1| unknown [Glycine max]                                   64   2e-08

>gb|AFK35383.1| unknown [Lotus japonicus]
          Length = 266

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/60 (66%), Positives = 41/60 (68%), Gaps = 11/60 (18%)
 Frame = -2

Query: 327 SNAGLSSSDCGESIVSSPVLD-------PFASPSIAH----LIPEKPLPEKGKLLQAVMK 181
           SN GLSSSDC ESIVSSPV D       P   PS+A     L PEKPLPEKGKLLQAVMK
Sbjct: 113 SNNGLSSSDCEESIVSSPVFDNMPQPQFPLPLPSVAQSMIELTPEKPLPEKGKLLQAVMK 172


>ref|XP_003541981.1| PREDICTED: uncharacterized protein LOC100806513 [Glycine max]
          Length = 251

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/52 (69%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
 Frame = -2

Query: 327 SNAGLSSSDCGESIVSSPVLDPFASP---SIAHLIPEKPLPEKGKLLQAVMK 181
           SN G SSSDC ESIVSSPV+D    P   S+  L P+KPLPEKGKLLQAVMK
Sbjct: 109 SNNGHSSSDCEESIVSSPVIDHLPQPQPQSMIELTPDKPLPEKGKLLQAVMK 160


>ref|XP_002313539.1| predicted protein [Populus trichocarpa] gi|222849947|gb|EEE87494.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/63 (58%), Positives = 40/63 (63%), Gaps = 14/63 (22%)
 Frame = -2

Query: 327 SNAGLSSSDCGESIVSSPVLDPFASPS--------------IAHLIPEKPLPEKGKLLQA 190
           S+ G SSSDC ESIVSSPV+DP   PS                 L+PEKPLPEKGKLLQA
Sbjct: 111 SSNGFSSSDCEESIVSSPVIDPTPQPSQLPPPAAPQTIPQAAIELVPEKPLPEKGKLLQA 170

Query: 189 VMK 181
           VMK
Sbjct: 171 VMK 173


>ref|XP_003539436.1| PREDICTED: uncharacterized protein LOC100799553 [Glycine max]
          Length = 256

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/54 (64%), Positives = 38/54 (70%), Gaps = 5/54 (9%)
 Frame = -2

Query: 327 SNAGLSSSDCGESIVSSPVLDPFASP-----SIAHLIPEKPLPEKGKLLQAVMK 181
           SN G S SDC ESIVSSPV+D    P     S+  L P+KPLPEKGKLLQAVMK
Sbjct: 109 SNNGHSLSDCEESIVSSPVIDHLPQPQPQTQSMIELTPDKPLPEKGKLLQAVMK 162


>gb|ACU23190.1| unknown [Glycine max]
          Length = 217

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/54 (64%), Positives = 38/54 (70%), Gaps = 5/54 (9%)
 Frame = -2

Query: 327 SNAGLSSSDCGESIVSSPVLDPFASP-----SIAHLIPEKPLPEKGKLLQAVMK 181
           SN G S SDC ESIVSSPV+D    P     S+  L P+KPLPEKGKLLQAVMK
Sbjct: 71  SNNGHSLSDCEESIVSSPVIDHLPQPQPQTQSMIELTPDKPLPEKGKLLQAVMK 124


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