BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030526
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    91   1e-16
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-11

>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/71 (61%), Positives = 53/71 (74%)
 Frame = -3

Query: 219 LIQKLLGERKLKEALNLLRLMKKHDRPSFEEPFNDYISKFGTVDDAIDYLTALRVNNFPP 40
           LI+KLL  RKL+EALNLLRLMK+H+ P F EPF  YIS+FGTVDDA D+L AL V  +P 
Sbjct: 517 LIEKLLEVRKLEEALNLLRLMKQHNHPPFPEPFVQYISRFGTVDDAADFLKALSVKEYPS 576

Query: 39  VSVYSHAIESF 7
            S Y +  +SF
Sbjct: 577 TSAYLNVFQSF 587


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/71 (59%), Positives = 51/71 (71%)
 Frame = -3

Query: 219 LIQKLLGERKLKEALNLLRLMKKHDRPSFEEPFNDYISKFGTVDDAIDYLTALRVNNFPP 40
           +I KLLG RKL+EA+NLL LMKK + P F EPF +YISKFGTV+DA ++L AL    +P 
Sbjct: 519 MINKLLGVRKLEEAINLLHLMKKQNYPPFPEPFIEYISKFGTVEDAGEFLNALSAKKYPS 578

Query: 39  VSVYSHAIESF 7
            S Y H  ESF
Sbjct: 579 QSAYVHVFESF 589


>ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|222868635|gb|EEF05766.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 39/73 (53%), Positives = 52/73 (71%)
 Frame = -3

Query: 219 LIQKLLGERKLKEALNLLRLMKKHDRPSFEEPFNDYISKFGTVDDAIDYLTALRVNNFPP 40
           LI+KLL  RKL+EA +LLRLMKKH+ P F EPF+ YISKFGTV+DA+++   L V  +P 
Sbjct: 366 LIEKLLQVRKLEEATDLLRLMKKHNYPPFPEPFDQYISKFGTVEDAVNFFKVLSVKEYPS 425

Query: 39  VSVYSHAIESFCK 1
              Y   ++SF +
Sbjct: 426 SVAYLRMLDSFLR 438


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/71 (57%), Positives = 47/71 (66%)
 Frame = -3

Query: 219 LIQKLLGERKLKEALNLLRLMKKHDRPSFEEPFNDYISKFGTVDDAIDYLTALRVNNFPP 40
           LI+ LL  RKL+EA+ LLRLMKK + P F EPF  YISKFGTV DA D+L  L    +P 
Sbjct: 512 LIKNLLEVRKLEEAIALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPS 571

Query: 39  VSVYSHAIESF 7
           VS Y H   SF
Sbjct: 572 VSAYLHIFNSF 582


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/70 (54%), Positives = 47/70 (67%)
 Frame = -3

Query: 219 LIQKLLGERKLKEALNLLRLMKKHDRPSFEEPFNDYISKFGTVDDAIDYLTALRVNNFPP 40
           LI+KLLG  K +EAL LLRLMK H+ P +  PF  YISKFG+V+DA  +L AL V ++P 
Sbjct: 518 LIEKLLGVMKFEEALELLRLMKSHNYPPYHLPFVPYISKFGSVEDAEAFLKALSVKSYPS 577

Query: 39  VSVYSHAIES 10
             VY    ES
Sbjct: 578 HIVYVQVFES 587