BLASTX nr result

ID: Coptis21_contig00030506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030506
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521346.1| hypothetical protein RCOM_0653450 [Ricinus c...   145   3e-33
emb|CAN69469.1| hypothetical protein VITISV_042556 [Vitis vinifera]   139   2e-31
ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31
ref|XP_002276086.2| PREDICTED: uncharacterized protein LOC100246...   137   9e-31
ref|XP_002309476.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30

>ref|XP_002521346.1| hypothetical protein RCOM_0653450 [Ricinus communis]
           gi|223539424|gb|EEF41014.1| hypothetical protein
           RCOM_0653450 [Ricinus communis]
          Length = 426

 Score =  145 bits (367), Expect = 3e-33
 Identities = 82/151 (54%), Positives = 104/151 (68%), Gaps = 14/151 (9%)
 Frame = -3

Query: 413 KTPSSRGKSSNGMKRSVHFYPVSVIVDEDSRPCGHKSLY---QEQPKVISL-------DE 264
           KTPSSRG   NG KRSV FYPVSVIV EDSRPCGHK+LY   QE P ++++       +E
Sbjct: 264 KTPSSRG---NGTKRSVRFYPVSVIVGEDSRPCGHKTLYGTDQENPSLMTITTTRVPTNE 320

Query: 263 ELKFHIMEKNRKIEEAAREFLKGYQEKKKMNDFQMRDA----HRDYQXXXXXXXXXXXXD 96
           ELKFH+M ++R++EE AR+ L+ +Q KKK  +F + +     +++ +            D
Sbjct: 321 ELKFHVMNESRRVEEVARDLLRNFQ-KKKQEEFDVSNGNVPRYQELEEDDDNEEEEDDDD 379

Query: 95  AESYASSDLFELDNFAAIGIERYREELPVYE 3
           A SYASSDLFELDN +AIGIERYREELPVYE
Sbjct: 380 AASYASSDLFELDNLSAIGIERYREELPVYE 410


>emb|CAN69469.1| hypothetical protein VITISV_042556 [Vitis vinifera]
          Length = 403

 Score =  139 bits (351), Expect = 2e-31
 Identities = 81/143 (56%), Positives = 100/143 (69%), Gaps = 6/143 (4%)
 Frame = -3

Query: 413 KTPSSRGKSSNGMKRSVHFYPVSVIVDEDSRPCGHKSLYQEQPKVIS----LDEELKFHI 246
           KTPSSRGK SNG KRSV FYPVSVIVDED RPCGHK LY++   + +    ++E++K +I
Sbjct: 260 KTPSSRGKLSNGTKRSVRFYPVSVIVDEDCRPCGHKCLYEDGKPIRTVTNFINEDIKLNI 319

Query: 245 MEKNRKIEEAAREFLKGYQEKKKMNDFQMRDA--HRDYQXXXXXXXXXXXXDAESYASSD 72
            + NR++EEAAR+ LK YQ+K   N+  +R+A  H D              DA S ASSD
Sbjct: 320 -DHNRRVEEAARDLLKNYQKK---NESYLREAANHED-----------SDDDAASCASSD 364

Query: 71  LFELDNFAAIGIERYREELPVYE 3
           LFELDN +AIGI+RYREELPVYE
Sbjct: 365 LFELDNLSAIGIDRYREELPVYE 387


>ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|222846854|gb|EEE84401.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score =  138 bits (348), Expect = 4e-31
 Identities = 77/140 (55%), Positives = 95/140 (67%), Gaps = 3/140 (2%)
 Frame = -3

Query: 413 KTPSSRG---KSSNGMKRSVHFYPVSVIVDEDSRPCGHKSLYQEQPKVISLDEELKFHIM 243
           KTPSSRG    S+NG KRSV FYPVSVIVDED RPCGHK+LY    + +S   +LK H+M
Sbjct: 241 KTPSSRGGKLSSNNGAKRSVRFYPVSVIVDEDCRPCGHKNLYGSDRQEMS---KLKLHVM 297

Query: 242 EKNRKIEEAAREFLKGYQEKKKMNDFQMRDAHRDYQXXXXXXXXXXXXDAESYASSDLFE 63
            +NR+IEE AR+ LK YQ+KK+ ++ +  ++  D              D  S ASSDLFE
Sbjct: 298 NENRRIEEVARDLLKNYQKKKEEHEEEEEESDDD-------------DDIASCASSDLFE 344

Query: 62  LDNFAAIGIERYREELPVYE 3
           LDN + +GIERYREELPVYE
Sbjct: 345 LDNLSVVGIERYREELPVYE 364


>ref|XP_002276086.2| PREDICTED: uncharacterized protein LOC100246362 [Vitis vinifera]
          Length = 403

 Score =  137 bits (345), Expect = 9e-31
 Identities = 80/143 (55%), Positives = 99/143 (69%), Gaps = 6/143 (4%)
 Frame = -3

Query: 413 KTPSSRGKSSNGMKRSVHFYPVSVIVDEDSRPCGHKSLYQEQPKVIS----LDEELKFHI 246
           KTPSSR K SNG KRSV FYPVSVIVDED RPCGHK LY++   + +    ++E++K +I
Sbjct: 260 KTPSSRSKLSNGTKRSVRFYPVSVIVDEDCRPCGHKCLYEDGKPIRTVTNFINEDIKLNI 319

Query: 245 MEKNRKIEEAAREFLKGYQEKKKMNDFQMRDA--HRDYQXXXXXXXXXXXXDAESYASSD 72
            + NR++EEAAR+ LK YQ+K   N+  +R+A  H D              DA S ASSD
Sbjct: 320 -DHNRRVEEAARDLLKNYQKK---NESYLREAANHED-----------SDDDAASCASSD 364

Query: 71  LFELDNFAAIGIERYREELPVYE 3
           LFELDN +AIGI+RYREELPVYE
Sbjct: 365 LFELDNLSAIGIDRYREELPVYE 387


>ref|XP_002309476.1| predicted protein [Populus trichocarpa] gi|222855452|gb|EEE92999.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score =  136 bits (342), Expect = 2e-30
 Identities = 76/154 (49%), Positives = 95/154 (61%), Gaps = 18/154 (11%)
 Frame = -3

Query: 410 TPSSRGKSSNGMKRSVHFYPVSVIVDEDSRPCGHKSLYQEQPKVI--------------- 276
           +PS+R K  NG+KRSV FYPVSVIVDED RP GHKSLY+E+   +               
Sbjct: 286 SPSTREKLRNGVKRSVRFYPVSVIVDEDCRPVGHKSLYEEEESSLMSVSLPTAWKIGKSP 345

Query: 275 --SLDEELKFHIMEKNRKIEEAAREFLKGYQEKKKMNDFQMRDAHRDYQXXXXXXXXXXX 102
               D+ELK+ +MEK+R++EE AREFLK +++ +K ND  M D    Y            
Sbjct: 346 SRKTDDELKYQVMEKSRRVEEVAREFLKDHRQNQKKNDVTMIDVRGKYNDRYHDEDEDED 405

Query: 101 XDAESYASSDLFELDNFAAIGIE-RYREELPVYE 3
            DA SY+SSDLFELD+ A IG + RY EELPVYE
Sbjct: 406 DDAASYSSSDLFELDHLAVIGNDRRYCEELPVYE 439


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