BLASTX nr result
ID: Coptis21_contig00030504
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030504 (537 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAM64819.1| hypothetical protein [Beta vulgaris] 328 2e-88 emb|CBH19893.1| cell division control 20 [Solanum lycopersicum v... 328 4e-88 gb|AAF14048.1|AF029262_1 putative cdc20 protein [Arabidopsis tha... 326 1e-87 ref|NP_195052.1| cell division cycle 20, cofactor of APC complex... 326 1e-87 ref|NP_001190900.1| cell division cycle 20, cofactor of APC comp... 326 1e-87 >dbj|BAM64819.1| hypothetical protein [Beta vulgaris] Length = 610 Score = 328 bits (842), Expect = 2e-88 Identities = 152/178 (85%), Positives = 165/178 (92%) Frame = -3 Query: 535 TVYLWDASTASTSELVTVDDENGPVTSVSWAPDGRHIAVGLNNAEVHLWDTASNRRLRTL 356 TVYLWDAST STSELVTVDD+ GPVTSV+WAPDGRHIAVGLN++EV LWD+ +NR+LRTL Sbjct: 315 TVYLWDASTGSTSELVTVDDDKGPVTSVNWAPDGRHIAVGLNDSEVQLWDSTANRQLRTL 374 Query: 355 KGGHRSRVGSLDWNNHILSTGGMDGLITNNDVRIRDHIVEKYVGHHQEVCGLKWSSSGQQ 176 KGGHR+RVGSL WNNHIL+TG MDG I NNDVRIRDH+VE Y GH QEVCGLKWS+SGQQ Sbjct: 375 KGGHRARVGSLAWNNHILTTGSMDGKIINNDVRIRDHVVETYRGHQQEVCGLKWSASGQQ 434 Query: 175 LASGGNDNLLHIWDRSVASSNSPTQWLHRLEDHTAAVKALAWCPFQANLLASGGGGGD 2 LASGGNDN+LHIWDRS+ASSNS TQWLHRLEDHTAAVKALAWCPFQ NLLASGGGGGD Sbjct: 435 LASGGNDNILHIWDRSLASSNSATQWLHRLEDHTAAVKALAWCPFQGNLLASGGGGGD 492 >emb|CBH19893.1| cell division control 20 [Solanum lycopersicum var. cerasiforme] Length = 453 Score = 328 bits (840), Expect = 4e-88 Identities = 153/178 (85%), Positives = 163/178 (91%) Frame = -3 Query: 535 TVYLWDASTASTSELVTVDDENGPVTSVSWAPDGRHIAVGLNNAEVHLWDTASNRRLRTL 356 TVYLWDAS +TSELVTVD+ENGPVTSV WAPDGRHIAVGLNN+EV LWD+ +NR LRTL Sbjct: 157 TVYLWDASDGATSELVTVDEENGPVTSVKWAPDGRHIAVGLNNSEVQLWDSTANRLLRTL 216 Query: 355 KGGHRSRVGSLDWNNHILSTGGMDGLITNNDVRIRDHIVEKYVGHHQEVCGLKWSSSGQQ 176 KGGHRSRVG+LDWNNHIL+TGGMDG I NNDVRIR+ IV+ Y GHHQEVCGLKWS+SGQQ Sbjct: 217 KGGHRSRVGALDWNNHILTTGGMDGQIINNDVRIRNPIVDTYQGHHQEVCGLKWSASGQQ 276 Query: 175 LASGGNDNLLHIWDRSVASSNSPTQWLHRLEDHTAAVKALAWCPFQANLLASGGGGGD 2 LASGGNDNLLHIWDRS ASSNS TQWLHRLEDHTAAVKALAWCPFQ NLLASGGGG D Sbjct: 277 LASGGNDNLLHIWDRSTASSNSTTQWLHRLEDHTAAVKALAWCPFQGNLLASGGGGSD 334 >gb|AAF14048.1|AF029262_1 putative cdc20 protein [Arabidopsis thaliana] Length = 460 Score = 326 bits (836), Expect = 1e-87 Identities = 151/178 (84%), Positives = 166/178 (93%) Frame = -3 Query: 535 TVYLWDASTASTSELVTVDDENGPVTSVSWAPDGRHIAVGLNNAEVHLWDTASNRRLRTL 356 TVYLWDAST STSELVT+D+E GPVTS++WAPDGRH+AVGLNN+EV LWD+ASNR+LRTL Sbjct: 161 TVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTL 220 Query: 355 KGGHRSRVGSLDWNNHILSTGGMDGLITNNDVRIRDHIVEKYVGHHQEVCGLKWSSSGQQ 176 KGGH+SRVGSL WNNHIL+TGGMDGLI NNDVRIR IVE Y GH QEVCGLKWS SGQQ Sbjct: 221 KGGHQSRVGSLAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQ 280 Query: 175 LASGGNDNLLHIWDRSVASSNSPTQWLHRLEDHTAAVKALAWCPFQANLLASGGGGGD 2 LASGGNDN++HIWDRSVASSNS TQWLHRLE+HT+AVKALAWCPFQANLLA+GGGGGD Sbjct: 281 LASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGD 338 >ref|NP_195052.1| cell division cycle 20, cofactor of APC complex [Arabidopsis thaliana] gi|6491864|gb|AAF14049.1|AF029263_1 putative cdc20 protein [Arabidopsis thaliana] gi|4490293|emb|CAB38784.1| WD-repeat protein-like protein [Arabidopsis thaliana] gi|7270274|emb|CAB80043.1| WD-repeat protein-like protein [Arabidopsis thaliana] gi|332660798|gb|AEE86198.1| cell division cycle 20, cofactor of APC complex [Arabidopsis thaliana] Length = 447 Score = 326 bits (836), Expect = 1e-87 Identities = 151/178 (84%), Positives = 166/178 (93%) Frame = -3 Query: 535 TVYLWDASTASTSELVTVDDENGPVTSVSWAPDGRHIAVGLNNAEVHLWDTASNRRLRTL 356 TVYLWDAST STSELVT+D+E GPVTS++WAPDGRH+AVGLNN+EV LWD+ASNR+LRTL Sbjct: 151 TVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTL 210 Query: 355 KGGHRSRVGSLDWNNHILSTGGMDGLITNNDVRIRDHIVEKYVGHHQEVCGLKWSSSGQQ 176 KGGH+SRVGSL WNNHIL+TGGMDGLI NNDVRIR IVE Y GH QEVCGLKWS SGQQ Sbjct: 211 KGGHQSRVGSLAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQ 270 Query: 175 LASGGNDNLLHIWDRSVASSNSPTQWLHRLEDHTAAVKALAWCPFQANLLASGGGGGD 2 LASGGNDN++HIWDRSVASSNS TQWLHRLE+HT+AVKALAWCPFQANLLA+GGGGGD Sbjct: 271 LASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGD 328 >ref|NP_001190900.1| cell division cycle 20, cofactor of APC complex [Arabidopsis thaliana] gi|332660799|gb|AEE86199.1| cell division cycle 20, cofactor of APC complex [Arabidopsis thaliana] Length = 441 Score = 326 bits (836), Expect = 1e-87 Identities = 151/178 (84%), Positives = 166/178 (93%) Frame = -3 Query: 535 TVYLWDASTASTSELVTVDDENGPVTSVSWAPDGRHIAVGLNNAEVHLWDTASNRRLRTL 356 TVYLWDAST STSELVT+D+E GPVTS++WAPDGRH+AVGLNN+EV LWD+ASNR+LRTL Sbjct: 151 TVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTL 210 Query: 355 KGGHRSRVGSLDWNNHILSTGGMDGLITNNDVRIRDHIVEKYVGHHQEVCGLKWSSSGQQ 176 KGGH+SRVGSL WNNHIL+TGGMDGLI NNDVRIR IVE Y GH QEVCGLKWS SGQQ Sbjct: 211 KGGHQSRVGSLAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQ 270 Query: 175 LASGGNDNLLHIWDRSVASSNSPTQWLHRLEDHTAAVKALAWCPFQANLLASGGGGGD 2 LASGGNDN++HIWDRSVASSNS TQWLHRLE+HT+AVKALAWCPFQANLLA+GGGGGD Sbjct: 271 LASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGD 328