BLASTX nr result

ID: Coptis21_contig00030425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030425
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631909.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain...   144   7e-33
emb|CBI38405.3| unnamed protein product [Vitis vinifera]              144   7e-33
emb|CBI40706.3| unnamed protein product [Vitis vinifera]              142   4e-32
ref|XP_002270022.1| PREDICTED: putative acyl-CoA synthetase YngI...   142   4e-32
ref|XP_002307787.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31

>ref|XP_003631909.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain-fatty-acid--CoA
           ligase-like [Vitis vinifera]
          Length = 419

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/81 (85%), Positives = 74/81 (91%)
 Frame = -1

Query: 245 ISFLQRAATVYRDRVSVIYGSVNYTWKETLERCLRLASALTQLGISRGDVVATLAPNVPA 66
           I+FL+R+AT YRDR SV+YGSV YTW ET ERCL+LASALTQLGISRGDVVA LAPNVPA
Sbjct: 61  ITFLERSATAYRDRTSVVYGSVKYTWSETQERCLKLASALTQLGISRGDVVAVLAPNVPA 120

Query: 65  MYELHFGVPMAGAVLCTLNIR 3
           MYELHFGVPMAGAVLCTLN R
Sbjct: 121 MYELHFGVPMAGAVLCTLNTR 141


>emb|CBI38405.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/81 (85%), Positives = 74/81 (91%)
 Frame = -1

Query: 245 ISFLQRAATVYRDRVSVIYGSVNYTWKETLERCLRLASALTQLGISRGDVVATLAPNVPA 66
           I+FL+R+AT YRDR SV+YGSV YTW ET ERCL+LASALTQLGISRGDVVA LAPNVPA
Sbjct: 61  ITFLERSATAYRDRTSVVYGSVKYTWSETQERCLKLASALTQLGISRGDVVAVLAPNVPA 120

Query: 65  MYELHFGVPMAGAVLCTLNIR 3
           MYELHFGVPMAGAVLCTLN R
Sbjct: 121 MYELHFGVPMAGAVLCTLNTR 141


>emb|CBI40706.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/81 (80%), Positives = 76/81 (93%)
 Frame = -1

Query: 245 ISFLQRAATVYRDRVSVIYGSVNYTWKETLERCLRLASALTQLGISRGDVVATLAPNVPA 66
           ISFL+R+A+VYRDRV+++YG V +TW++TLERC RLASA+T LGISRGDVVA LAPN+PA
Sbjct: 26  ISFLERSASVYRDRVAIVYGRVKFTWRDTLERCTRLASAITHLGISRGDVVAALAPNIPA 85

Query: 65  MYELHFGVPMAGAVLCTLNIR 3
           MYELHFGVPMAGAVLCTLNIR
Sbjct: 86  MYELHFGVPMAGAVLCTLNIR 106


>ref|XP_002270022.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Vitis vinifera]
          Length = 566

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/81 (80%), Positives = 76/81 (93%)
 Frame = -1

Query: 245 ISFLQRAATVYRDRVSVIYGSVNYTWKETLERCLRLASALTQLGISRGDVVATLAPNVPA 66
           ISFL+R+A+VYRDRV+++YG V +TW++TLERC RLASA+T LGISRGDVVA LAPN+PA
Sbjct: 26  ISFLERSASVYRDRVAIVYGRVKFTWRDTLERCTRLASAITHLGISRGDVVAALAPNIPA 85

Query: 65  MYELHFGVPMAGAVLCTLNIR 3
           MYELHFGVPMAGAVLCTLNIR
Sbjct: 86  MYELHFGVPMAGAVLCTLNIR 106


>ref|XP_002307787.1| predicted protein [Populus trichocarpa] gi|222857236|gb|EEE94783.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score =  139 bits (349), Expect = 3e-31
 Identities = 66/81 (81%), Positives = 72/81 (88%)
 Frame = -1

Query: 245 ISFLQRAATVYRDRVSVIYGSVNYTWKETLERCLRLASALTQLGISRGDVVATLAPNVPA 66
           ISFL+R+A VYRDRVSV YG + YTWKET ERC+RLASAL  LGIS GDVVA LAPN+PA
Sbjct: 17  ISFLERSAIVYRDRVSVAYGDIKYTWKETHERCVRLASALAHLGISPGDVVAALAPNIPA 76

Query: 65  MYELHFGVPMAGAVLCTLNIR 3
           MYELHFGVPMAGAVLCTLN+R
Sbjct: 77  MYELHFGVPMAGAVLCTLNVR 97


Top