BLASTX nr result

ID: Coptis21_contig00030070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030070
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like...   206   1e-51
emb|CBI39502.3| unnamed protein product [Vitis vinifera]              206   1e-51
ref|XP_002512419.1| DNA helicase, putative [Ricinus communis] gi...   200   9e-50
ref|XP_004167539.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   190   1e-46
ref|XP_004144821.1| PREDICTED: ATP-dependent DNA helicase Q-like...   190   1e-46

>ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Vitis
           vinifera]
          Length = 893

 Score =  206 bits (525), Expect = 1e-51
 Identities = 104/139 (74%), Positives = 116/139 (83%)
 Frame = +2

Query: 2   EYLEDELDAFQNVDDFDVASGAFCAYVSTENVDTLKPSETVDLQMKGEERLLLLQGPLEH 181
           EYLE+E+D FQ+VDD+DV+ G F     TE+  T   SET+D  MK +ERL LL+GPLE 
Sbjct: 474 EYLENEVDLFQSVDDWDVSCGEFSGQPPTEH--TFGSSETLDPSMKLDERLTLLKGPLEQ 531

Query: 182 GPTIIYVPTRKETLALAKFLCRFGVKAAAYNAKLPKSHLRRVHKEFHQNDLQVIVATIAF 361
           GPTIIYVPTRKETL +AK+LCR GVKAAAYNAKLPKSHLRRVHKEFH N LQV+VATIAF
Sbjct: 532 GPTIIYVPTRKETLNIAKYLCRCGVKAAAYNAKLPKSHLRRVHKEFHDNALQVVVATIAF 591

Query: 362 GMGIDKSNVRRIIHYGWPQ 418
           GMGIDK NVRRIIHYGWPQ
Sbjct: 592 GMGIDKLNVRRIIHYGWPQ 610


>emb|CBI39502.3| unnamed protein product [Vitis vinifera]
          Length = 1537

 Score =  206 bits (525), Expect = 1e-51
 Identities = 104/139 (74%), Positives = 116/139 (83%)
 Frame = +2

Query: 2   EYLEDELDAFQNVDDFDVASGAFCAYVSTENVDTLKPSETVDLQMKGEERLLLLQGPLEH 181
           EYLE+E+D FQ+VDD+DV+ G F     TE+  T   SET+D  MK +ERL LL+GPLE 
Sbjct: 433 EYLENEVDLFQSVDDWDVSCGEFSGQPPTEH--TFGSSETLDPSMKLDERLTLLKGPLEQ 490

Query: 182 GPTIIYVPTRKETLALAKFLCRFGVKAAAYNAKLPKSHLRRVHKEFHQNDLQVIVATIAF 361
           GPTIIYVPTRKETL +AK+LCR GVKAAAYNAKLPKSHLRRVHKEFH N LQV+VATIAF
Sbjct: 491 GPTIIYVPTRKETLNIAKYLCRCGVKAAAYNAKLPKSHLRRVHKEFHDNALQVVVATIAF 550

Query: 362 GMGIDKSNVRRIIHYGWPQ 418
           GMGIDK NVRRIIHYGWPQ
Sbjct: 551 GMGIDKLNVRRIIHYGWPQ 569


>ref|XP_002512419.1| DNA helicase, putative [Ricinus communis]
           gi|223548380|gb|EEF49871.1| DNA helicase, putative
           [Ricinus communis]
          Length = 803

 Score =  200 bits (509), Expect = 9e-50
 Identities = 98/139 (70%), Positives = 111/139 (79%)
 Frame = +2

Query: 2   EYLEDELDAFQNVDDFDVASGAFCAYVSTENVDTLKPSETVDLQMKGEERLLLLQGPLEH 181
           +YLE+++D FQNVDD+DVA G FC      + D  K  +TVD     EERL LLQ PL  
Sbjct: 378 DYLENDVDIFQNVDDWDVAFGEFCGQSPCNDWDVHKLPKTVDPPCAAEERLKLLQEPLRE 437

Query: 182 GPTIIYVPTRKETLALAKFLCRFGVKAAAYNAKLPKSHLRRVHKEFHQNDLQVIVATIAF 361
           GPTIIYVPTRKETL +A +LC FG+KAAAYNA LPKSHLRRVHKEFH+N L+V+VATIAF
Sbjct: 438 GPTIIYVPTRKETLRIANYLCDFGLKAAAYNASLPKSHLRRVHKEFHENMLEVVVATIAF 497

Query: 362 GMGIDKSNVRRIIHYGWPQ 418
           GMGIDKSNVRRIIHYGWPQ
Sbjct: 498 GMGIDKSNVRRIIHYGWPQ 516


>ref|XP_004167539.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
           SIM-like [Cucumis sativus]
          Length = 821

 Score =  190 bits (482), Expect = 1e-46
 Identities = 92/139 (66%), Positives = 113/139 (81%)
 Frame = +2

Query: 2   EYLEDELDAFQNVDDFDVASGAFCAYVSTENVDTLKPSETVDLQMKGEERLLLLQGPLEH 181
           EYLE+E+D FQ+VDD+DVA G FC  +  E+ D    +E ++L  K +ER    Q  L+ 
Sbjct: 398 EYLENEVDVFQSVDDWDVAYGEFCGQLVCEDTDV--DTEKINLLDKADERQKSSQESLDQ 455

Query: 182 GPTIIYVPTRKETLALAKFLCRFGVKAAAYNAKLPKSHLRRVHKEFHQNDLQVIVATIAF 361
           GPTIIYVPTRKETL+++KFLC+ GVKAAAYNA LPKSHLR VHK+FH+N+++V+VATIAF
Sbjct: 456 GPTIIYVPTRKETLSISKFLCQCGVKAAAYNASLPKSHLRMVHKDFHENNVEVVVATIAF 515

Query: 362 GMGIDKSNVRRIIHYGWPQ 418
           GMGIDKSNVRRIIHYGWPQ
Sbjct: 516 GMGIDKSNVRRIIHYGWPQ 534


>ref|XP_004144821.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Cucumis
           sativus]
          Length = 821

 Score =  190 bits (482), Expect = 1e-46
 Identities = 92/139 (66%), Positives = 113/139 (81%)
 Frame = +2

Query: 2   EYLEDELDAFQNVDDFDVASGAFCAYVSTENVDTLKPSETVDLQMKGEERLLLLQGPLEH 181
           EYLE+E+D FQ+VDD+DVA G FC  +  E+ D    +E ++L  K +ER    Q  L+ 
Sbjct: 398 EYLENEVDVFQSVDDWDVAYGEFCGQLVCEDTDV--DTEKINLLDKADERQKSSQESLDQ 455

Query: 182 GPTIIYVPTRKETLALAKFLCRFGVKAAAYNAKLPKSHLRRVHKEFHQNDLQVIVATIAF 361
           GPTIIYVPTRKETL+++KFLC+ GVKAAAYNA LPKSHLR VHK+FH+N+++V+VATIAF
Sbjct: 456 GPTIIYVPTRKETLSISKFLCQCGVKAAAYNASLPKSHLRMVHKDFHENNVEVVVATIAF 515

Query: 362 GMGIDKSNVRRIIHYGWPQ 418
           GMGIDKSNVRRIIHYGWPQ
Sbjct: 516 GMGIDKSNVRRIIHYGWPQ 534


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