BLASTX nr result

ID: Coptis21_contig00029982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029982
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]    80   1e-13
ref|XP_002530238.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_004145411.1| PREDICTED: uncharacterized protein LOC101209...    65   4e-09
emb|CAN77571.1| hypothetical protein VITISV_008517 [Vitis vinifera]    64   2e-08
gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]        62   6e-08

>emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]
          Length = 1355

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/96 (43%), Positives = 56/96 (58%)
 Frame = +2

Query: 8   SLKPEYENLESNILMENTLPSLAAVCATIQREETRKKTMNSEVKSSIFEFTVLLAENDFR 187
           SL  E+E+L  +ILM   LPSL +VC+TIQREE R+K M  E  ++  +    +A  ++ 
Sbjct: 188 SLGSEFEDLRCHILMSPELPSLKSVCSTIQREEVRRKVMIRETVTNSSDTRAYIAHKNYE 247

Query: 188 KKSQGFEKGKGKREPSHCDHCGKNWHTKDRCWELYP 295
            KS      KGKR    C+HC    HT DRCW L+P
Sbjct: 248 GKSI-----KGKRLDLKCEHCNAPGHTSDRCWVLHP 278


>ref|XP_002530238.1| conserved hypothetical protein [Ricinus communis]
           gi|223530242|gb|EEF32144.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 317

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
 Frame = +2

Query: 8   SLKPEYENLESNILMENTLPSLAAVCATIQREETRKKTMNSEVKSSIFEFTVLLAENDFR 187
           +L P+Y++L+S+++M   LPSL  VC TIQREE  ++ MN    +++ E         F 
Sbjct: 143 ALGPDYDDLKSHLIMSPKLPSLQTVCNTIQREEVHRRVMNHNATANVVEGGQPAEARAFL 202

Query: 188 KKSQGFEKGKGKREP----SHCDHCGKN--WHTKDRCWELYP 295
             +Q   +G   R+P    SHC+H G +   H KD+CW L+P
Sbjct: 203 SNTQRPYRG---RQPDLKCSHCEHIGHSGIGHQKDKCWILHP 241


>ref|XP_004145411.1| PREDICTED: uncharacterized protein LOC101209213 [Cucumis sativus]
          Length = 620

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/94 (36%), Positives = 49/94 (52%)
 Frame = +2

Query: 11  LKPEYENLESNILMENTLPSLAAVCATIQREETRKKTMNSEVKSSIFEFTVLLAENDFRK 190
           L P+++ +   IL   ++PSL  VC+ I+ EE R   MN     +I       A    R 
Sbjct: 259 LNPKFDVVRGQILGHRSIPSLMKVCSEIRLEEDRTSAMNISATPTIDS-----AAFSARS 313

Query: 191 KSQGFEKGKGKREPSHCDHCGKNWHTKDRCWELY 292
            +   +K  GK  P  CDHC K WHTK++CW+L+
Sbjct: 314 SNSSSDKHNGKPIPV-CDHCKKQWHTKEQCWKLH 346


>emb|CAN77571.1| hypothetical protein VITISV_008517 [Vitis vinifera]
          Length = 709

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/94 (32%), Positives = 48/94 (51%)
 Frame = +2

Query: 11  LKPEYENLESNILMENTLPSLAAVCATIQREETRKKTMNSEVKSSIFEFTVLLAENDFRK 190
           L    + +   IL    LPS+   C  ++REE+R+K M  +  S+  E + L A +  + 
Sbjct: 165 LNKNLDEVRGRILGTKPLPSIQEACFEVRREESRQKVMQGKTSSTSSESSALAAHDSNQS 224

Query: 191 KSQGFEKGKGKREPSHCDHCGKNWHTKDRCWELY 292
                +K  G+     C+HC K  HTKDRCW++Y
Sbjct: 225 AYDNKQKKNGR---PWCNHCHKPGHTKDRCWQIY 255


>gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]
          Length = 1347

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
 Frame = +2

Query: 41  NILMENTLPSLAAVCATIQREETRKKTMNSEVK------SSIFEFTVLLAENDFRK---- 190
           +IL    LP L  VCA IQ+EETRKK  +S  K      SS F  T   + N  ++    
Sbjct: 108 SILNSAELPPLNVVCARIQKEETRKKVFSSYQKEKGHDESSAFNSTTDPSANAAKRFINS 167

Query: 191 ---KSQGFEKGKGKREPSHCDHCGKNWHTKDRCWELYPH 298
               ++G   G+  R    C++CGK  H K++CW L+PH
Sbjct: 168 RGASTKGHGGGRTGRTGILCEYCGKTGHPKEKCWILHPH 206


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