BLASTX nr result

ID: Coptis21_contig00029978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029978
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334917.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
gb|EEE53254.1| hypothetical protein OsJ_36175 [Oryza sativa Japo...    70   1e-10
gb|EEC69322.1| hypothetical protein OsI_38415 [Oryza sativa Indi...    70   1e-10
ref|NP_001176962.1| Os12g0498650 [Oryza sativa Japonica Group] g...    70   1e-10
gb|ABA98602.2| retrotransposon protein, putative, unclassified [...    70   1e-10

>ref|XP_002334917.1| predicted protein [Populus trichocarpa] gi|222832254|gb|EEE70731.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
 Frame = +1

Query: 1   AGIGNLQNLGMLYLYGNRLSEYIPSSIRNMSQLFSLDMSYNFLEESIASSLGN-QILQTL 177
           + IG LQN+G+LYL  N++S  IPSS+ NM+    +D+S N L+ SI SS GN Q L  L
Sbjct: 38  SSIGKLQNVGILYLNTNKISGSIPSSMGNMTACVDVDLSLNNLQGSIPSSFGNCQNLLAL 97

Query: 178 DLSYNNLTGPIPNQ 219
            LS+NNL+GPIP +
Sbjct: 98  TLSHNNLSGPIPKE 111


>gb|EEE53254.1| hypothetical protein OsJ_36175 [Oryza sativa Japonica Group]
          Length = 662

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/71 (52%), Positives = 47/71 (66%)
 Frame = +1

Query: 7   IGNLQNLGMLYLYGNRLSEYIPSSIRNMSQLFSLDMSYNFLEESIASSLGNQILQTLDLS 186
           IG L+ L  LYLY N LS  IP++I N++ L  L ++ N L  SI SSLGN  L+TL+L 
Sbjct: 167 IGKLKKLSNLYLYDNNLSGQIPATIGNLTMLSRLSLNENMLTGSIPSSLGNCPLETLELQ 226

Query: 187 YNNLTGPIPNQ 219
            N LTGPIP +
Sbjct: 227 NNRLTGPIPKE 237


>gb|EEC69322.1| hypothetical protein OsI_38415 [Oryza sativa Indica Group]
          Length = 612

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/71 (52%), Positives = 47/71 (66%)
 Frame = +1

Query: 7   IGNLQNLGMLYLYGNRLSEYIPSSIRNMSQLFSLDMSYNFLEESIASSLGNQILQTLDLS 186
           IG L+ L  LYLY N LS  IP++I N++ L  L ++ N L  SI SSLGN  L+TL+L 
Sbjct: 118 IGKLKKLSNLYLYDNNLSGQIPATIGNLTMLSRLSLNENMLTGSIPSSLGNCPLETLELQ 177

Query: 187 YNNLTGPIPNQ 219
            N LTGPIP +
Sbjct: 178 NNRLTGPIPKE 188


>ref|NP_001176962.1| Os12g0498650 [Oryza sativa Japonica Group]
           gi|255670320|dbj|BAH95690.1| Os12g0498650 [Oryza sativa
           Japonica Group]
          Length = 702

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/71 (52%), Positives = 47/71 (66%)
 Frame = +1

Query: 7   IGNLQNLGMLYLYGNRLSEYIPSSIRNMSQLFSLDMSYNFLEESIASSLGNQILQTLDLS 186
           IG L+ L  LYLY N LS  IP++I N++ L  L ++ N L  SI SSLGN  L+TL+L 
Sbjct: 167 IGKLKKLSNLYLYDNNLSGQIPATIGNLTMLSRLSLNENMLTGSIPSSLGNCPLETLELQ 226

Query: 187 YNNLTGPIPNQ 219
            N LTGPIP +
Sbjct: 227 NNRLTGPIPKE 237


>gb|ABA98602.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2202

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/71 (52%), Positives = 47/71 (66%)
 Frame = +1

Query: 7    IGNLQNLGMLYLYGNRLSEYIPSSIRNMSQLFSLDMSYNFLEESIASSLGNQILQTLDLS 186
            IG L+ L  LYLY N LS  IP++I N++ L  L ++ N L  SI SSLGN  L+TL+L 
Sbjct: 1667 IGKLKKLSNLYLYDNNLSGQIPATIGNLTMLSRLSLNENMLTGSIPSSLGNCPLETLELQ 1726

Query: 187  YNNLTGPIPNQ 219
             N LTGPIP +
Sbjct: 1727 NNRLTGPIPKE 1737


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