BLASTX nr result

ID: Coptis21_contig00029976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029976
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233764.1| TAGL12 transcription factor [Solanum lycoper...   134   1e-29
dbj|BAB70740.2| putative MADS-domain transcription factor MpMADS...   130   8e-29
gb|AFX72883.1| MADS-box protein AGL12 [Aquilegia coerulea]            130   1e-28
ref|XP_002325956.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_003533515.1| PREDICTED: agamous-like MADS-box protein AGL...   129   3e-28

>ref|NP_001233764.1| TAGL12 transcription factor [Solanum lycopersicum]
           gi|24967140|gb|AAM33103.2| TAGL12 transcription factor
           [Solanum lycopersicum]
          Length = 201

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/91 (71%), Positives = 83/91 (91%), Gaps = 1/91 (1%)
 Frame = +3

Query: 159 MARGKVQVKRIDNQVHRQVTFCKRRAGLLKKAKELSILCDADIGVIIFSNHGKLYELSTK 338
           MARGKVQ+KRI+N VHRQVTFCKRRAGLLKKAKELS+LCDA++G+ IFS HGKLYEL+TK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEVGLFIFSAHGKLYELATK 60

Query: 339 GTIEGLIERYMLQTAKGVQVSEE-ETNQPME 428
           G+++GLIERY +++ KGV+V+EE +  QP++
Sbjct: 61  GSMQGLIERY-IKSTKGVEVAEEAKDTQPLD 90


>dbj|BAB70740.2| putative MADS-domain transcription factor MpMADS5 [Magnolia
           praecocissima]
          Length = 204

 Score =  130 bits (328), Expect = 8e-29
 Identities = 62/92 (67%), Positives = 77/92 (83%)
 Frame = +3

Query: 159 MARGKVQVKRIDNQVHRQVTFCKRRAGLLKKAKELSILCDADIGVIIFSNHGKLYELSTK 338
           MARGK+Q+KRI+N VHRQVTFCKRRAGLLKKA+  S+LCD DIG++IFS HGKLYEL+TK
Sbjct: 1   MARGKIQMKRIENSVHRQVTFCKRRAGLLKKARXXSVLCDVDIGLMIFSTHGKLYELATK 60

Query: 339 GTIEGLIERYMLQTAKGVQVSEEETNQPMEAE 434
           GT+EGLIERY L T++G Q+      +P E++
Sbjct: 61  GTMEGLIERY-LGTSRGAQIEGGPAXZPPESD 91


>gb|AFX72883.1| MADS-box protein AGL12 [Aquilegia coerulea]
          Length = 234

 Score =  130 bits (327), Expect = 1e-28
 Identities = 72/126 (57%), Positives = 86/126 (68%), Gaps = 34/126 (26%)
 Frame = +3

Query: 159 MARGKVQVKRIDNQVHRQVTFCKRRAGLLKKAKELSILCDADIGVIIFSNHGKLYELSTK 338
           MARGKVQ+KRI+N VHRQVTFCKRRAGLLKKAKELSILCDAD+GVIIFSN+GKLY+LSTK
Sbjct: 1   MARGKVQMKRIENLVHRQVTFCKRRAGLLKKAKELSILCDADVGVIIFSNNGKLYDLSTK 60

Query: 339 GTI----------------------------------EGLIERYMLQTAKGVQVSEEETN 416
           G++                                  +GL+ERYM ++AKG QVS+E+ N
Sbjct: 61  GSLFQPILSLVFITFSYYYSKLDLIVVFVQLYSQRSMQGLVERYM-KSAKGAQVSDEDAN 119

Query: 417 QPMEAE 434
           Q  E+E
Sbjct: 120 QSSESE 125


>ref|XP_002325956.1| predicted protein [Populus trichocarpa] gi|222862831|gb|EEF00338.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/79 (78%), Positives = 75/79 (94%)
 Frame = +3

Query: 159 MARGKVQVKRIDNQVHRQVTFCKRRAGLLKKAKELSILCDADIGVIIFSNHGKLYELSTK 338
           MARGKVQ++RI+N VHRQVTFCKRRAGLLKKAKELS+LCDA+IGV+IFS HGKLYEL+TK
Sbjct: 1   MARGKVQLRRIENHVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVVIFSAHGKLYELATK 60

Query: 339 GTIEGLIERYMLQTAKGVQ 395
           GT++GLIERYM ++++G Q
Sbjct: 61  GTMQGLIERYM-KSSRGAQ 78


>ref|XP_003533515.1| PREDICTED: agamous-like MADS-box protein AGL12-like [Glycine max]
          Length = 203

 Score =  129 bits (323), Expect = 3e-28
 Identities = 67/97 (69%), Positives = 78/97 (80%), Gaps = 11/97 (11%)
 Frame = +3

Query: 159 MARGKVQVKRIDNQVHRQVTFCKRRAGLLKKAKELSILCDADIGVIIFSNHGKLYELSTK 338
           MARGKVQ+KRI+N VHRQVTFCKRRAGLLKKAKELS+LCDA+IG+ IFS HGKLYEL+TK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 339 GTIEGLIERYMLQT-----------AKGVQVSEEETN 416
           GT++GLIERYM  T           A  + V++EETN
Sbjct: 61  GTMQGLIERYMKFTRGAQPEAAAPEAHPLLVAKEETN 97


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