BLASTX nr result

ID: Coptis21_contig00029947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029947
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17313.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-...    56   3e-06

>emb|CBI17313.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/70 (44%), Positives = 43/70 (61%)
 Frame = +2

Query: 101 KSEKADISGSSKKELALVPSSSAGPSSCYPAIAADVSTAKLYVYPSPLAKYEEIVADPGV 280
           K+E+    G   KEL +   SSA  S   P++  + + +  + YP PLAKYE+IV+ P +
Sbjct: 7   KTEEGGGGGGGGKELGMTSQSSANQS---PSLRNE-TVSNYHPYPPPLAKYEDIVSSPKL 62

Query: 281 FMSTLEKLHA 310
           FM TLEKLHA
Sbjct: 63  FMGTLEKLHA 72


>ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-like [Vitis vinifera]
          Length = 482

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/70 (44%), Positives = 43/70 (61%)
 Frame = +2

Query: 101 KSEKADISGSSKKELALVPSSSAGPSSCYPAIAADVSTAKLYVYPSPLAKYEEIVADPGV 280
           K+E+    G   KEL +   SSA  S   P++  + + +  + YP PLAKYE+IV+ P +
Sbjct: 6   KTEEGGGGGGGGKELGMTSQSSANQS---PSLRNE-TVSNYHPYPPPLAKYEDIVSSPKL 61

Query: 281 FMSTLEKLHA 310
           FM TLEKLHA
Sbjct: 62  FMGTLEKLHA 71


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