BLASTX nr result

ID: Coptis21_contig00029942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029942
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_04532936.1| LOW QUALITY PROTEIN: cell wall-associated hyd...   165   4e-39
ref|ZP_02997467.1| hypothetical protein PROSTU_00109 [Providenci...   164   5e-39
ref|ZP_21730109.1| hypothetical protein HALTITAN_3299 [Halomonas...   162   2e-38
gb|ABJ03470.1| conserved hypothetical protein [Escherichia coli ...   157   7e-37
gb|ABI99685.1| hypothetical protein APECO1_1785 [Escherichia col...   140   8e-32

>ref|ZP_04532936.1| LOW QUALITY PROTEIN: cell wall-associated hydrolase [Escherichia
           sp. 3_2_53FAA] gi|226903369|gb|EEH89628.1| LOW QUALITY
           PROTEIN: cell wall-associated hydrolase [Escherichia sp.
           3_2_53FAA]
          Length = 156

 Score =  165 bits (417), Expect = 4e-39
 Identities = 83/113 (73%), Positives = 91/113 (80%)
 Frame = -2

Query: 341 HLRTPPLIFGRRPPQSNYPPYTVLDPDNGPELEPQSCQGGISRLAPRELASTLQSLPPIL 162
           +LR PPL+F RRPPQSNYPP TV +PD GP LE Q+ +GGISR AP  LASTLQSLPPIL
Sbjct: 10  NLRAPPLLFRRRPPQSNYPPDTVRNPDYGPTLEHQTLKGGISRSAPCRLASTLQSLPPIL 69

Query: 161 HKQIQSPVQSYSKGSRGLSV*PRIHCIFTAISISLSISWRQWGSRYAIRAGRN 3
           H + Q  V SYSKGSRGLSV PR+HCIFTA SISLS+ WRQ G  YAIRAGRN
Sbjct: 70  HIKAQCSVSSYSKGSRGLSVLPRVHCIFTASSISLSLGWRQPGHHYAIRAGRN 122


>ref|ZP_02997467.1| hypothetical protein PROSTU_00109 [Providencia stuartii ATCC 25827]
           gi|188023829|gb|EDU61869.1| hypothetical protein
           PROSTU_00109 [Providencia stuartii ATCC 25827]
          Length = 189

 Score =  164 bits (416), Expect = 5e-39
 Identities = 84/113 (74%), Positives = 90/113 (79%)
 Frame = -2

Query: 341 HLRTPPLIFGRRPPQSNYPPYTVLDPDNGPELEPQSCQGGISRLAPRELASTLQSLPPIL 162
           +LR PPL FGRRPPQSNYPP TV  PD G  LE Q+ +GGISRLAP  LASTLQSLPPIL
Sbjct: 43  NLRAPPLRFGRRPPQSNYPPDTVRTPDYGATLEHQTLKGGISRLAPCRLASTLQSLPPIL 102

Query: 161 HKQIQSPVQSYSKGSRGLSV*PRIHCIFTAISISLSISWRQWGSRYAIRAGRN 3
           H + Q  V SYSKGSRGLSV PR+HCIFTA SISLS+ WRQ G  YAIRAGRN
Sbjct: 103 HIKAQCSVSSYSKGSRGLSVLPRVHCIFTASSISLSLGWRQPGHHYAIRAGRN 155


>ref|ZP_21730109.1| hypothetical protein HALTITAN_3299 [Halomonas titanicae BH1]
           gi|445563935|gb|ELY20074.1| hypothetical protein
           HALTITAN_3299 [Halomonas titanicae BH1]
          Length = 163

 Score =  162 bits (411), Expect = 2e-38
 Identities = 80/96 (83%), Positives = 83/96 (86%)
 Frame = -3

Query: 346 EGTFVLLR*SLGGDRPSQTTHHTLSSIRITDLS*NLKVARVVFQGWLHANWRPRFKASHL 167
           EGTFVLLR SLGGDRPSQTTHHTLSSIRITDLS N   AR+VFQGWL  NWRP FKAS L
Sbjct: 68  EGTFVLLRYSLGGDRPSQTTHHTLSSIRITDLSENANDARLVFQGWLPPNWRPEFKASQL 127

Query: 166 SYTSKFKVQCKAIVKVHGVFPSSRGYTASSQRFQFH 59
           SYT    VQC+AIVKVHGVFPSSRGYTASS+RFQFH
Sbjct: 128 SYTGNISVQCEAIVKVHGVFPSSRGYTASSRRFQFH 163


>gb|ABJ03470.1| conserved hypothetical protein [Escherichia coli APEC O1]
          Length = 217

 Score =  157 bits (398), Expect = 7e-37
 Identities = 82/114 (71%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
 Frame = -2

Query: 341 HLRTPPLIFGRRPPQSNYPPYTVLDPD-NGPELEPQSCQGGISRLAPRELASTLQSLPPI 165
           +LR PPL+F RRPPQSNYPP TV  P   GP LE Q+ +GGISR AP  LASTLQSLPPI
Sbjct: 70  NLRAPPLLFRRRPPQSNYPPDTVRKPGITGPTLEHQTLKGGISRSAPCRLASTLQSLPPI 129

Query: 164 LHKQIQSPVQSYSKGSRGLSV*PRIHCIFTAISISLSISWRQWGSRYAIRAGRN 3
           LH + Q  V SYSKGSRGLSV PR+HCIFTA SISLS+ WRQ G  YAIRAGRN
Sbjct: 130 LHIKAQCSVSSYSKGSRGLSVLPRVHCIFTASSISLSLGWRQPGHHYAIRAGRN 183


>gb|ABI99685.1| hypothetical protein APECO1_1785 [Escherichia coli APEC O1]
          Length = 187

 Score =  140 bits (354), Expect = 8e-32
 Identities = 75/114 (65%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
 Frame = -2

Query: 341 HLRTPPLIFGRR-PPQSNYPPYTVLDPDNGPELEPQSCQGGISRLAPRELASTLQSLPPI 165
           +LR PPL+F     P    PP TV +PD G  LE Q+ +GGISR AP  LASTLQSLPPI
Sbjct: 45  NLRAPPLLFXEENAPVKTTPPDTVRNPDYGSTLEHQTLKGGISRSAPCRLASTLQSLPPI 104

Query: 164 LHKQIQSPVQSYSKGSRGLSV*PRIHCIFTAISISLSISWRQWGSRYAIRAGRN 3
           LH + Q  V SYSKGSRGLSV PR+HCIFTA SISLS+ WRQ G  YAIRAGRN
Sbjct: 105 LHIKAQCSVSSYSKGSRGLSVLPRVHCIFTASSISLSLGWRQPGHHYAIRAGRN 158


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