BLASTX nr result

ID: Coptis21_contig00029929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029929
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272517.2| PREDICTED: uncharacterized protein LOC100245...   148   1e-33
emb|CBI27524.3| unnamed protein product [Vitis vinifera]              148   1e-33
ref|XP_002515019.1| protein binding protein, putative [Ricinus c...   139   8e-31
ref|XP_002315643.1| predicted protein [Populus trichocarpa] gi|2...   136   5e-30
ref|NP_563922.1| RING/U-box domain-containing protein [Arabidops...   135   1e-29

>ref|XP_002272517.2| PREDICTED: uncharacterized protein LOC100245965 [Vitis vinifera]
          Length = 255

 Score =  148 bits (374), Expect = 1e-33
 Identities = 65/96 (67%), Positives = 79/96 (82%)
 Frame = -3

Query: 751 CGICMEACTKMVLPNCGHSMCIDCFRNWNLRSQTCPFCRDNLKRVNSDDLWVLSSNCDVI 572
           CGICME CTKMVLPNCGHSMCI CF +WN+RSQ+CPFCR +LKRV+S DLWVL+ N DV+
Sbjct: 160 CGICMETCTKMVLPNCGHSMCICCFHDWNVRSQSCPFCRGSLKRVSSRDLWVLTGNIDVV 219

Query: 571 DKATLAEENLRCFYLYVNNLPLANANTIFFIHDYMI 464
           D  TLA+E+LR FYLY++NLP    +T   ++DYMI
Sbjct: 220 DTVTLAKEDLRRFYLYIDNLPPLMHDTHSLLYDYMI 255


>emb|CBI27524.3| unnamed protein product [Vitis vinifera]
          Length = 247

 Score =  148 bits (374), Expect = 1e-33
 Identities = 65/96 (67%), Positives = 79/96 (82%)
 Frame = -3

Query: 751 CGICMEACTKMVLPNCGHSMCIDCFRNWNLRSQTCPFCRDNLKRVNSDDLWVLSSNCDVI 572
           CGICME CTKMVLPNCGHSMCI CF +WN+RSQ+CPFCR +LKRV+S DLWVL+ N DV+
Sbjct: 152 CGICMETCTKMVLPNCGHSMCICCFHDWNVRSQSCPFCRGSLKRVSSRDLWVLTGNIDVV 211

Query: 571 DKATLAEENLRCFYLYVNNLPLANANTIFFIHDYMI 464
           D  TLA+E+LR FYLY++NLP    +T   ++DYMI
Sbjct: 212 DTVTLAKEDLRRFYLYIDNLPPLMHDTHSLLYDYMI 247


>ref|XP_002515019.1| protein binding protein, putative [Ricinus communis]
           gi|223546070|gb|EEF47573.1| protein binding protein,
           putative [Ricinus communis]
          Length = 253

 Score =  139 bits (349), Expect = 8e-31
 Identities = 62/96 (64%), Positives = 71/96 (73%)
 Frame = -3

Query: 751 CGICMEACTKMVLPNCGHSMCIDCFRNWNLRSQTCPFCRDNLKRVNSDDLWVLSSNCDVI 572
           CGICME   KMVLPNCGHS+CI CF +WN RSQ+CPFCR +LKRV S DLWVL +N D+I
Sbjct: 158 CGICMEDSAKMVLPNCGHSLCISCFHDWNTRSQSCPFCRGSLKRVKSLDLWVLINNSDII 217

Query: 571 DKATLAEENLRCFYLYVNNLPLANANTIFFIHDYMI 464
           D  T+A ENLR FYLY+  LPL    T   + DYMI
Sbjct: 218 DTVTIARENLRRFYLYIEKLPLLMPETHAILFDYMI 253


>ref|XP_002315643.1| predicted protein [Populus trichocarpa] gi|222864683|gb|EEF01814.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  136 bits (342), Expect = 5e-30
 Identities = 61/96 (63%), Positives = 72/96 (75%)
 Frame = -3

Query: 751 CGICMEACTKMVLPNCGHSMCIDCFRNWNLRSQTCPFCRDNLKRVNSDDLWVLSSNCDVI 572
           CGICME   KMVLPNCGHS+CI CF +WN+RSQ+CPFCR +LKR++  DLWVL SN DVI
Sbjct: 155 CGICMENSAKMVLPNCGHSLCISCFHDWNVRSQSCPFCRGSLKRMSCTDLWVLISNDDVI 214

Query: 571 DKATLAEENLRCFYLYVNNLPLANANTIFFIHDYMI 464
           D   LA EN+R FYLY++NLP     T   + DYMI
Sbjct: 215 DTVALAGENIRRFYLYMDNLPFLVPETQAILFDYMI 250


>ref|NP_563922.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|4850408|gb|AAD31078.1|AC007357_27 Contains PF|00097
           Zinc finger (C3HC4) ring finger motif [Arabidopsis
           thaliana] gi|21593124|gb|AAM65073.1| unknown
           [Arabidopsis thaliana] gi|87116602|gb|ABD19665.1|
           At1g13195 [Arabidopsis thaliana]
           gi|110742119|dbj|BAE98989.1| hypothetical protein
           [Arabidopsis thaliana] gi|332190861|gb|AEE28982.1|
           RING/U-box domain-containing protein [Arabidopsis
           thaliana]
          Length = 260

 Score =  135 bits (339), Expect = 1e-29
 Identities = 56/92 (60%), Positives = 73/92 (79%)
 Frame = -3

Query: 751 CGICMEACTKMVLPNCGHSMCIDCFRNWNLRSQTCPFCRDNLKRVNSDDLWVLSSNCDVI 572
           CGIC+E CTKMVLPNC HSMCI C+RNWNL+SQ+CPFCR ++KRVNS+DLWVL+ + DV+
Sbjct: 162 CGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAGDNDVV 221

Query: 571 DKATLAEENLRCFYLYVNNLPLANANTIFFIH 476
           D  T + E+L  FYLY+N+LP      +F ++
Sbjct: 222 DTRTASREDLFRFYLYINSLPKDYPEALFVVY 253


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