BLASTX nr result
ID: Coptis21_contig00029929
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00029929 (753 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272517.2| PREDICTED: uncharacterized protein LOC100245... 148 1e-33 emb|CBI27524.3| unnamed protein product [Vitis vinifera] 148 1e-33 ref|XP_002515019.1| protein binding protein, putative [Ricinus c... 139 8e-31 ref|XP_002315643.1| predicted protein [Populus trichocarpa] gi|2... 136 5e-30 ref|NP_563922.1| RING/U-box domain-containing protein [Arabidops... 135 1e-29 >ref|XP_002272517.2| PREDICTED: uncharacterized protein LOC100245965 [Vitis vinifera] Length = 255 Score = 148 bits (374), Expect = 1e-33 Identities = 65/96 (67%), Positives = 79/96 (82%) Frame = -3 Query: 751 CGICMEACTKMVLPNCGHSMCIDCFRNWNLRSQTCPFCRDNLKRVNSDDLWVLSSNCDVI 572 CGICME CTKMVLPNCGHSMCI CF +WN+RSQ+CPFCR +LKRV+S DLWVL+ N DV+ Sbjct: 160 CGICMETCTKMVLPNCGHSMCICCFHDWNVRSQSCPFCRGSLKRVSSRDLWVLTGNIDVV 219 Query: 571 DKATLAEENLRCFYLYVNNLPLANANTIFFIHDYMI 464 D TLA+E+LR FYLY++NLP +T ++DYMI Sbjct: 220 DTVTLAKEDLRRFYLYIDNLPPLMHDTHSLLYDYMI 255 >emb|CBI27524.3| unnamed protein product [Vitis vinifera] Length = 247 Score = 148 bits (374), Expect = 1e-33 Identities = 65/96 (67%), Positives = 79/96 (82%) Frame = -3 Query: 751 CGICMEACTKMVLPNCGHSMCIDCFRNWNLRSQTCPFCRDNLKRVNSDDLWVLSSNCDVI 572 CGICME CTKMVLPNCGHSMCI CF +WN+RSQ+CPFCR +LKRV+S DLWVL+ N DV+ Sbjct: 152 CGICMETCTKMVLPNCGHSMCICCFHDWNVRSQSCPFCRGSLKRVSSRDLWVLTGNIDVV 211 Query: 571 DKATLAEENLRCFYLYVNNLPLANANTIFFIHDYMI 464 D TLA+E+LR FYLY++NLP +T ++DYMI Sbjct: 212 DTVTLAKEDLRRFYLYIDNLPPLMHDTHSLLYDYMI 247 >ref|XP_002515019.1| protein binding protein, putative [Ricinus communis] gi|223546070|gb|EEF47573.1| protein binding protein, putative [Ricinus communis] Length = 253 Score = 139 bits (349), Expect = 8e-31 Identities = 62/96 (64%), Positives = 71/96 (73%) Frame = -3 Query: 751 CGICMEACTKMVLPNCGHSMCIDCFRNWNLRSQTCPFCRDNLKRVNSDDLWVLSSNCDVI 572 CGICME KMVLPNCGHS+CI CF +WN RSQ+CPFCR +LKRV S DLWVL +N D+I Sbjct: 158 CGICMEDSAKMVLPNCGHSLCISCFHDWNTRSQSCPFCRGSLKRVKSLDLWVLINNSDII 217 Query: 571 DKATLAEENLRCFYLYVNNLPLANANTIFFIHDYMI 464 D T+A ENLR FYLY+ LPL T + DYMI Sbjct: 218 DTVTIARENLRRFYLYIEKLPLLMPETHAILFDYMI 253 >ref|XP_002315643.1| predicted protein [Populus trichocarpa] gi|222864683|gb|EEF01814.1| predicted protein [Populus trichocarpa] Length = 250 Score = 136 bits (342), Expect = 5e-30 Identities = 61/96 (63%), Positives = 72/96 (75%) Frame = -3 Query: 751 CGICMEACTKMVLPNCGHSMCIDCFRNWNLRSQTCPFCRDNLKRVNSDDLWVLSSNCDVI 572 CGICME KMVLPNCGHS+CI CF +WN+RSQ+CPFCR +LKR++ DLWVL SN DVI Sbjct: 155 CGICMENSAKMVLPNCGHSLCISCFHDWNVRSQSCPFCRGSLKRMSCTDLWVLISNDDVI 214 Query: 571 DKATLAEENLRCFYLYVNNLPLANANTIFFIHDYMI 464 D LA EN+R FYLY++NLP T + DYMI Sbjct: 215 DTVALAGENIRRFYLYMDNLPFLVPETQAILFDYMI 250 >ref|NP_563922.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gi|4850408|gb|AAD31078.1|AC007357_27 Contains PF|00097 Zinc finger (C3HC4) ring finger motif [Arabidopsis thaliana] gi|21593124|gb|AAM65073.1| unknown [Arabidopsis thaliana] gi|87116602|gb|ABD19665.1| At1g13195 [Arabidopsis thaliana] gi|110742119|dbj|BAE98989.1| hypothetical protein [Arabidopsis thaliana] gi|332190861|gb|AEE28982.1| RING/U-box domain-containing protein [Arabidopsis thaliana] Length = 260 Score = 135 bits (339), Expect = 1e-29 Identities = 56/92 (60%), Positives = 73/92 (79%) Frame = -3 Query: 751 CGICMEACTKMVLPNCGHSMCIDCFRNWNLRSQTCPFCRDNLKRVNSDDLWVLSSNCDVI 572 CGIC+E CTKMVLPNC HSMCI C+RNWNL+SQ+CPFCR ++KRVNS+DLWVL+ + DV+ Sbjct: 162 CGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAGDNDVV 221 Query: 571 DKATLAEENLRCFYLYVNNLPLANANTIFFIH 476 D T + E+L FYLY+N+LP +F ++ Sbjct: 222 DTRTASREDLFRFYLYINSLPKDYPEALFVVY 253