BLASTX nr result

ID: Coptis21_contig00029926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029926
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509955.1| protein phosphatase 2c, putative [Ricinus co...   196   2e-48
ref|XP_002513570.1| protein phosphatase 2c, putative [Ricinus co...   191   5e-47
ref|XP_002266149.1| PREDICTED: probable protein phosphatase 2C 8...   187   1e-45
ref|XP_002265635.2| PREDICTED: uncharacterized protein LOC100241...   183   1e-44
ref|XP_002318387.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43

>ref|XP_002509955.1| protein phosphatase 2c, putative [Ricinus communis]
           gi|223549854|gb|EEF51342.1| protein phosphatase 2c,
           putative [Ricinus communis]
          Length = 350

 Score =  196 bits (498), Expect = 2e-48
 Identities = 103/193 (53%), Positives = 135/193 (69%), Gaps = 9/193 (4%)
 Frame = -3

Query: 554 GILVSTSTAEDNKKIPSLSHGSVSLCGRRRTMEDTVTIAPGLLTSKNEVVFDFFAVYDGH 375
           GIL++  ++E  + + S+SHGS S+ GRRR+MED VT+APG + +    V+DFFAVYDGH
Sbjct: 47  GILMAGGSSEGERSMRSVSHGSTSVIGRRRSMEDAVTVAPGGVVAGQSDVYDFFAVYDGH 106

Query: 374 GGSGVSHVCRDRLHRVLARGFEEEMDEIEVSWSEIDWKKKMEDCFLKMDDEVDEKG---- 207
           GG+ V++ C++R+H+++A     E+ + E S  E  W K M +CF KMDDEV   G    
Sbjct: 107 GGARVANACKERMHQLVAN----ELIKKERSSDESYWGKVMTECFKKMDDEVTGGGKGNL 162

Query: 206 -----IEVQNIKSVGSTALVALVGSNKLVVANCGDSRGVLSRGGVAVPLSHDHKPDRPDE 42
                + + +  +VGSTALV +VG  +LVVANCGDSR VL RGGVAV LS DHKPDRP E
Sbjct: 163 EGGEALVLSSENTVGSTALVVMVGKEELVVANCGDSRTVLCRGGVAVALSRDHKPDRPHE 222

Query: 41  MERVEAAGGRVIN 3
            ERVEAAGGRV+N
Sbjct: 223 RERVEAAGGRVVN 235


>ref|XP_002513570.1| protein phosphatase 2c, putative [Ricinus communis]
           gi|223547478|gb|EEF48973.1| protein phosphatase 2c,
           putative [Ricinus communis]
          Length = 352

 Score =  191 bits (486), Expect = 5e-47
 Identities = 98/174 (56%), Positives = 124/174 (71%)
 Frame = -3

Query: 524 DNKKIPSLSHGSVSLCGRRRTMEDTVTIAPGLLTSKNEVVFDFFAVYDGHGGSGVSHVCR 345
           D ++   +S+GS+S+ GRRR MED V +  G  T K    +DFF VYDGHGG+ V+  C+
Sbjct: 75  DLQRFAGMSYGSISVIGRRREMEDAVKVELGF-TEKGGESYDFFGVYDGHGGARVAEACK 133

Query: 344 DRLHRVLARGFEEEMDEIEVSWSEIDWKKKMEDCFLKMDDEVDEKGIEVQNIKSVGSTAL 165
           +RLHRVL     EE D        I+W+K ME+CF +MD+EV++        + VGSTA+
Sbjct: 134 ERLHRVLEEVIVEEEDGKSHKGRTIEWEKVMEECFKRMDEEVEKD-------RMVGSTAV 186

Query: 164 VALVGSNKLVVANCGDSRGVLSRGGVAVPLSHDHKPDRPDEMERVEAAGGRVIN 3
           VA+VG ++LVVANCGDSR VL RGGVAVPLS DHKPDRPDE+ERVEAAGGR+IN
Sbjct: 187 VAVVGRDELVVANCGDSRAVLCRGGVAVPLSVDHKPDRPDELERVEAAGGRIIN 240


>ref|XP_002266149.1| PREDICTED: probable protein phosphatase 2C 8 [Vitis vinifera]
           gi|297742328|emb|CBI34477.3| unnamed protein product
           [Vitis vinifera]
          Length = 393

 Score =  187 bits (475), Expect = 1e-45
 Identities = 98/182 (53%), Positives = 130/182 (71%), Gaps = 7/182 (3%)
 Frame = -3

Query: 527 EDNKKIPS-LSHGSVSLCGRRRTMEDTVTIAPGLLTSKNEVVFDFFAVYDGHGGSGVSHV 351
           E  K++ + + HGS+S+ GRRR MED +T+APG   S     +DF+AVYDGHGG+ V++ 
Sbjct: 91  EGEKRVSTCVPHGSMSVIGRRRAMEDALTVAPGEFDS-----YDFYAVYDGHGGAKVAYA 145

Query: 350 CRDRLHRVLARGFEEEMDEIEVSWSEIDWKKKMEDCFLKMDDEVDEKGIEVQN------I 189
           CRDRLHR+LA+  E+ ++        IDW+  M   F KMD+E++ +  +V++      +
Sbjct: 146 CRDRLHRLLAKEIEDAIN----GEGRIDWENVMVASFSKMDEEINGEANQVEDRSTSSLL 201

Query: 188 KSVGSTALVALVGSNKLVVANCGDSRGVLSRGGVAVPLSHDHKPDRPDEMERVEAAGGRV 9
           +S+GSTA+V +VG  KLVVANCGDSR VL R GVAVPLS DHKPDRPDE ERVEAAGG+V
Sbjct: 202 RSMGSTAVVVVVGPEKLVVANCGDSRAVLCRRGVAVPLSRDHKPDRPDERERVEAAGGKV 261

Query: 8   IN 3
           IN
Sbjct: 262 IN 263


>ref|XP_002265635.2| PREDICTED: uncharacterized protein LOC100241034 [Vitis vinifera]
          Length = 650

 Score =  183 bits (465), Expect = 1e-44
 Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 6/180 (3%)
 Frame = -3

Query: 524 DNKKIPSLSHGSVSLCGRRRTMEDTVTIAPGLLTSKNEVVFDFFAVYDGHGGSGVSHVCR 345
           D +    + HGSVS+ GRRR MEDT+T+APG L      ++DF+AVYDGHGG  V+H CR
Sbjct: 240 DKRSSTCIPHGSVSVIGRRRAMEDTLTVAPGELE-----LYDFYAVYDGHGGDQVAHACR 294

Query: 344 DRLHRVLARGFEEEMDEIEVSWSEIDWKKKMEDCFLKMDDEVDEKGIEVQN------IKS 183
           +RLH+++A+  E   D        I W+  M   F KMD+E++ +  E+ +      ++S
Sbjct: 295 NRLHKLVAKEVEHRRD----GEGGIHWENVMAASFSKMDEEINVEASEMADRSASSLLRS 350

Query: 182 VGSTALVALVGSNKLVVANCGDSRGVLSRGGVAVPLSHDHKPDRPDEMERVEAAGGRVIN 3
           +GSTA+V +VG+ KLV+ANCGDSR VL   GVAVPLS DHKPDRPDE ERVEAAGG VIN
Sbjct: 351 MGSTAVVVVVGAEKLVIANCGDSRAVLCCNGVAVPLSRDHKPDRPDERERVEAAGGNVIN 410



 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 6/124 (4%)
 Frame = -3

Query: 434 GLLTSKNEVVFDFFAVYDGHGGSGVSHVCRDRLHRVLARGFEEEMDEIEVSWSEIDWKKK 255
           GL+ +    ++ F+AVYDG GG+ V+H CRDRLH++LA   E   D +E +    +W+  
Sbjct: 35  GLVFAGKLALYHFYAVYDGQGGAKVAHACRDRLHKLLAEEIENGRDGVEGT----NWENM 90

Query: 254 MEDCFLKMDDEVDEKGIEVQN------IKSVGSTALVALVGSNKLVVANCGDSRGVLSRG 93
           M   F KMD+E  ++  E ++      ++ +GSTA V +V   KLVVANC  SR VL R 
Sbjct: 91  MVAGFSKMDEETKDEASEEEDSSESSLLRWIGSTATVVVVDEEKLVVANCDHSRAVLCRS 150

Query: 92  GVAV 81
           GVAV
Sbjct: 151 GVAV 154


>ref|XP_002318387.1| predicted protein [Populus trichocarpa] gi|222859060|gb|EEE96607.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score =  180 bits (457), Expect = 1e-43
 Identities = 95/165 (57%), Positives = 120/165 (72%), Gaps = 1/165 (0%)
 Frame = -3

Query: 494 GSVSLCGRRRTMEDTVTIAPGLLT-SKNEVVFDFFAVYDGHGGSGVSHVCRDRLHRVLAR 318
           GSVS+ G R+ MEDTV +  G L+ +  E  +DFF VYDGHGG+ V+  C++RLHRVL  
Sbjct: 1   GSVSVIGGRKEMEDTVKVELGFLSFNDGEKKYDFFGVYDGHGGALVAEACKERLHRVLV- 59

Query: 317 GFEEEMDEIEVSWSEIDWKKKMEDCFLKMDDEVDEKGIEVQNIKSVGSTALVALVGSNKL 138
              EE+ E +     ++W+K ME+CF KMD+EV +        K +GSTA+VA+VG  ++
Sbjct: 60  ---EEIMEGKEGGGGVEWEKVMEECFRKMDEEVVKD-------KMIGSTAVVAVVGKEEV 109

Query: 137 VVANCGDSRGVLSRGGVAVPLSHDHKPDRPDEMERVEAAGGRVIN 3
           VVANCGDSR V+ RGGVAVPLS DHKPDRPDE+ERVEAAGGRVIN
Sbjct: 110 VVANCGDSRAVICRGGVAVPLSVDHKPDRPDELERVEAAGGRVIN 154


Top