BLASTX nr result

ID: Coptis21_contig00029920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029920
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236767.1| uncharacterized protein LOC100527745 precurs...   187   2e-45
ref|XP_002280078.1| PREDICTED: ribonuclease 3 [Vitis vinifera] g...   184   2e-44
gb|AFK47329.1| unknown [Lotus japonicus]                              182   6e-44
ref|XP_002511429.1| conserved hypothetical protein [Ricinus comm...   171   1e-40
ref|XP_002318642.1| predicted protein [Populus trichocarpa] gi|2...   168   9e-40

>ref|NP_001236767.1| uncharacterized protein LOC100527745 precursor [Glycine max]
           gi|255633098|gb|ACU16904.1| unknown [Glycine max]
          Length = 188

 Score =  187 bits (474), Expect = 2e-45
 Identities = 87/139 (62%), Positives = 116/139 (83%), Gaps = 1/139 (0%)
 Frame = -1

Query: 582 TSPFSLALQTLQQQLGYNFKSVNLLRRAMTHPSFSGENNRALSILGLHVIETSISLHCLE 403
           +SPFS AL+TLQ+QLGY FKS++LLRRA+TH SFS ENN+A +ILG  VIETS+S H L 
Sbjct: 38  SSPFSTALETLQKQLGYTFKSIDLLRRAVTHASFSEENNKAFAILGASVIETSVSFHLLS 97

Query: 402 RNIEMSPKELSRKVKEISEV-GACAIGGTRLGLEKIVRVSTKTNSTVPSVLCGAFRAVFG 226
           R++++S KEL+R++ +I+ V  +CA+ GTRLGL K+VRVS KTNS+ P+V+CGAFRA+FG
Sbjct: 98  RDVDLSSKELNRRLSQITNVDSSCAVDGTRLGLHKVVRVSPKTNSSAPAVVCGAFRAIFG 157

Query: 225 AIGVDAGNADDAGEVFWNV 169
           A+ +D G +DDAG VFWN+
Sbjct: 158 AVAIDTGKSDDAGNVFWNL 176


>ref|XP_002280078.1| PREDICTED: ribonuclease 3 [Vitis vinifera]
           gi|297733813|emb|CBI15060.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score =  184 bits (466), Expect = 2e-44
 Identities = 87/142 (61%), Positives = 119/142 (83%), Gaps = 1/142 (0%)
 Frame = -1

Query: 591 MESTSPFSLALQTLQQQLGYNFKSVNLLRRAMTHPSFSGENNRALSILGLHVIETSISLH 412
           ++ +SPFSLAL+TLQ+Q+GY F+S+ LLRRAMTH SFS ENN+ALSILG   IETS+SL 
Sbjct: 31  LKPSSPFSLALETLQKQIGYTFQSIGLLRRAMTHSSFSEENNKALSILGASTIETSVSLQ 90

Query: 411 CLERNIEMSPKELSRKVKEISEV-GACAIGGTRLGLEKIVRVSTKTNSTVPSVLCGAFRA 235
            L+++IE S K+L+R++ EIS+V  +CA+   RLGL+K++RVS KTN++ P+V+CGAFRA
Sbjct: 91  YLKKDIEASAKDLNRRISEISQVESSCAVDAMRLGLQKVIRVSPKTNASTPAVVCGAFRA 150

Query: 234 VFGAIGVDAGNADDAGEVFWNV 169
           +FGAI +D G +DDAG+VFW+V
Sbjct: 151 IFGAIAMDTGKSDDAGKVFWSV 172


>gb|AFK47329.1| unknown [Lotus japonicus]
          Length = 179

 Score =  182 bits (462), Expect = 6e-44
 Identities = 87/146 (59%), Positives = 115/146 (78%), Gaps = 1/146 (0%)
 Frame = -1

Query: 603 NAENMESTSPFSLALQTLQQQLGYNFKSVNLLRRAMTHPSFSGENNRALSILGLHVIETS 424
           +A+     SPF  AL+TLQ+QLGYNFK+++LLRRAMTH SFS ENN+ALSILG  VIETS
Sbjct: 22  HAQGHSLLSPFPSALETLQKQLGYNFKTISLLRRAMTHASFSEENNKALSILGAAVIETS 81

Query: 423 ISLHCLERNIEMSPKELSRKVKEISEV-GACAIGGTRLGLEKIVRVSTKTNSTVPSVLCG 247
            S H + ++I++S KEL+R++ ++S V  +CA+ G  LGL K+VRVS KTNS+ P+V+CG
Sbjct: 82  ASFHLISKDIDISAKELNRRLSQVSNVESSCAVDGVHLGLHKVVRVSPKTNSSAPAVVCG 141

Query: 246 AFRAVFGAIGVDAGNADDAGEVFWNV 169
           AFRA+FGAI +D G +DDAG VFW +
Sbjct: 142 AFRAIFGAIAIDTGKSDDAGNVFWTI 167


>ref|XP_002511429.1| conserved hypothetical protein [Ricinus communis]
           gi|223550544|gb|EEF52031.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 185

 Score =  171 bits (433), Expect = 1e-40
 Identities = 87/151 (57%), Positives = 117/151 (77%), Gaps = 1/151 (0%)
 Frame = -1

Query: 618 SKETNNAENMESTSPFSLALQTLQQQLGYNFKSVNLLRRAMTHPSFSGENNRALSILGLH 439
           + + N  +   S+SPF+ AL+ LQ+Q+  N   V LLRRAMTHPSFS ENNRALS++G +
Sbjct: 25  ANDRNYQKIKPSSSPFASALEALQKQIKQN---VGLLRRAMTHPSFSEENNRALSVMGSN 81

Query: 438 VIETSISLHCLERNIEMSPKELSRKVKEISEVG-ACAIGGTRLGLEKIVRVSTKTNSTVP 262
           VI+T +SL  L ++I++S KEL+R++ EIS+V  +CA+ G RLGL+K+VRVS KTNST P
Sbjct: 82  VIDTFVSLFSLRKDIDISSKELNRRIAEISKVETSCAVDGMRLGLDKVVRVSYKTNSTAP 141

Query: 261 SVLCGAFRAVFGAIGVDAGNADDAGEVFWNV 169
           +V+CGAFRA+FGAI +D G +DDAG VFW V
Sbjct: 142 AVVCGAFRALFGAIAIDTGKSDDAGSVFWGV 172


>ref|XP_002318642.1| predicted protein [Populus trichocarpa] gi|222859315|gb|EEE96862.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  168 bits (426), Expect = 9e-40
 Identities = 85/154 (55%), Positives = 112/154 (72%), Gaps = 1/154 (0%)
 Frame = -1

Query: 627 TTCSKETNNAENMESTSPFSLALQTLQQQLGYNFKSVNLLRRAMTHPSFSGENNRALSIL 448
           +T S     A     +SPF  AL  LQ Q+GY FK++  LRRAMTH SFS ENN+ALSIL
Sbjct: 15  STYSLAQFGASRKLKSSPFESALDILQNQIGYTFKNIGYLRRAMTHSSFSQENNKALSIL 74

Query: 447 GLHVIETSISLHCLERNIEMSPKELSRKVKEISEVG-ACAIGGTRLGLEKIVRVSTKTNS 271
           G +VI+TS+S++ L ++IE+S K+L+R + E ++V  +CA+ G RLGL ++VRVS KTNS
Sbjct: 75  GSNVIDTSVSMYYLGKDIEISSKDLNRWISENAKVDTSCAVDGMRLGLHRVVRVSPKTNS 134

Query: 270 TVPSVLCGAFRAVFGAIGVDAGNADDAGEVFWNV 169
           T P+V+C AFRA+FGAI +D    DDAG VFWNV
Sbjct: 135 TAPTVVCSAFRAIFGAIAIDTRKVDDAGSVFWNV 168


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