BLASTX nr result

ID: Coptis21_contig00029901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029901
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64919.1| hypothetical protein VITISV_027339 [Vitis vinifera]   213   1e-53
ref|XP_002277132.1| PREDICTED: CMP-N-acetylneuraminate-beta-gala...   212   2e-53
ref|XP_002306228.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-52
ref|XP_002523786.1| sialyltransferase, putative [Ricinus communi...   203   1e-50
emb|CAJ15145.1| sialyltransferase-like protein [Gossypium raimon...   200   1e-49

>emb|CAN64919.1| hypothetical protein VITISV_027339 [Vitis vinifera]
          Length = 389

 Score =  213 bits (543), Expect = 1e-53
 Identities = 98/140 (70%), Positives = 115/140 (82%), Gaps = 1/140 (0%)
 Frame = -3

Query: 417 RSPRFFGKWFEFRRVLRDWFRNKRFQPEIMLQLVDLVKRPLDKHYGFGNLN-RYASCAVV 241
           RSP+F+  W EFRR L DW+RNKRF PEIM  L+ LVK P+D+H G   L  RY+SCAVV
Sbjct: 113 RSPKFYRYWLEFRRNLNDWYRNKRFHPEIMSDLIRLVKHPIDEHNGLVGLGKRYSSCAVV 172

Query: 240 GNSGILLKTEYGELIDSHEIVIRLNNARTKGFEQSVGTKTSISFVNSNILHICARREGCF 61
           GNSGILL++EYGE+IDSHE VIRLNNAR   FE +VG+KTSISF+NSNILH+CARREGCF
Sbjct: 173 GNSGILLRSEYGEMIDSHEAVIRLNNARLDRFEHNVGSKTSISFINSNILHLCARREGCF 232

Query: 60  CHPYGETVPMVIYMCQAAHF 1
           CHPYG  VPM++Y+CQ  HF
Sbjct: 233 CHPYGVNVPMIMYICQPLHF 252


>ref|XP_002277132.1| PREDICTED: CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,
           3-sialyltransferase 1-like [Vitis vinifera]
          Length = 389

 Score =  212 bits (540), Expect = 2e-53
 Identities = 97/140 (69%), Positives = 115/140 (82%), Gaps = 1/140 (0%)
 Frame = -3

Query: 417 RSPRFFGKWFEFRRVLRDWFRNKRFQPEIMLQLVDLVKRPLDKHYGFGNLN-RYASCAVV 241
           RSP+F+  W EFRR L DW+RNKRF PEIM  L+ LVK P+D+H G   L  RY+SCAVV
Sbjct: 113 RSPKFYRYWLEFRRNLNDWYRNKRFHPEIMSDLIRLVKHPIDEHNGLVGLGKRYSSCAVV 172

Query: 240 GNSGILLKTEYGELIDSHEIVIRLNNARTKGFEQSVGTKTSISFVNSNILHICARREGCF 61
           GNSGILL+++YGE+IDSHE VIRLNNAR   FE +VG+KTSISF+NSNILH+CARREGCF
Sbjct: 173 GNSGILLRSDYGEMIDSHEAVIRLNNARLDRFEHNVGSKTSISFINSNILHLCARREGCF 232

Query: 60  CHPYGETVPMVIYMCQAAHF 1
           CHPYG  VPM++Y+CQ  HF
Sbjct: 233 CHPYGVNVPMIMYICQPLHF 252


>ref|XP_002306228.1| predicted protein [Populus trichocarpa] gi|222849192|gb|EEE86739.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  209 bits (531), Expect = 2e-52
 Identities = 94/140 (67%), Positives = 116/140 (82%), Gaps = 1/140 (0%)
 Frame = -3

Query: 417 RSPRFFGKWFEFRRVLRDWFRNKRFQPEIMLQLVDLVKRPLDKHYGF-GNLNRYASCAVV 241
           RSP+F+  W +FRR L DW R KR+QPEIM +L+ L+K P+D+H G  G+  RY SCAVV
Sbjct: 114 RSPQFYRYWLDFRRALHDWARKKRYQPEIMDELIGLLKGPIDRHNGLVGSERRYGSCAVV 173

Query: 240 GNSGILLKTEYGELIDSHEIVIRLNNARTKGFEQSVGTKTSISFVNSNILHICARREGCF 61
           GNSGIL++ EYGELID HE+VIRLNNART+ +E++VG KT+ISFVNSNILH+C RR+GCF
Sbjct: 174 GNSGILMQKEYGELIDRHEVVIRLNNARTERYERNVGAKTNISFVNSNILHLCGRRQGCF 233

Query: 60  CHPYGETVPMVIYMCQAAHF 1
           CHPYG  VPMV+Y+CQ AHF
Sbjct: 234 CHPYGANVPMVMYICQPAHF 253


>ref|XP_002523786.1| sialyltransferase, putative [Ricinus communis]
           gi|223536874|gb|EEF38512.1| sialyltransferase, putative
           [Ricinus communis]
          Length = 434

 Score =  203 bits (516), Expect = 1e-50
 Identities = 92/139 (66%), Positives = 115/139 (82%), Gaps = 1/139 (0%)
 Frame = -3

Query: 417 RSPRFFGKWFEFRRVLRDWFRNKRFQPEIMLQLVDLVKRPLDKHYGF-GNLNRYASCAVV 241
           RSP+F+  W EFRRVL+DW R KR+QP+IM +L+ LVK P+++  G  G+  +Y SCA+V
Sbjct: 158 RSPQFYRYWLEFRRVLQDWSRTKRYQPDIMNELIQLVKIPIERRKGLMGSNKKYGSCAIV 217

Query: 240 GNSGILLKTEYGELIDSHEIVIRLNNARTKGFEQSVGTKTSISFVNSNILHICARREGCF 61
           GNSGILL+ +YGELIDSHE+V RLNNART+ FEQ VG+KT++SFVNSNILH+CARR GCF
Sbjct: 218 GNSGILLQKDYGELIDSHEMVFRLNNARTERFEQHVGSKTNVSFVNSNILHLCARRVGCF 277

Query: 60  CHPYGETVPMVIYMCQAAH 4
           CHPYG  VPMV+Y+CQ  H
Sbjct: 278 CHPYGADVPMVMYICQPVH 296


>emb|CAJ15145.1| sialyltransferase-like protein [Gossypium raimondii]
          Length = 384

 Score =  200 bits (508), Expect = 1e-49
 Identities = 92/140 (65%), Positives = 113/140 (80%), Gaps = 1/140 (0%)
 Frame = -3

Query: 417 RSPRFFGKWFEFRRVLRDWFRNKRFQPEIMLQLVDLVKRPLDKHYGF-GNLNRYASCAVV 241
           RSP+F+  W +FRR L+ W R + FQP+IM+ LV LVK P+D H G   + N+Y SCAVV
Sbjct: 108 RSPKFYRYWLDFRRNLQHWARKRMFQPDIMMDLVTLVKVPIDSHNGLMSSDNKYKSCAVV 167

Query: 240 GNSGILLKTEYGELIDSHEIVIRLNNARTKGFEQSVGTKTSISFVNSNILHICARREGCF 61
           GNSGILL T++G+ ID HE VIRLNNART+ FE++VG+KTSISFVNSNILH+CARR+GCF
Sbjct: 168 GNSGILLNTDHGKFIDGHEAVIRLNNARTERFEKNVGSKTSISFVNSNILHLCARRDGCF 227

Query: 60  CHPYGETVPMVIYMCQAAHF 1
           CHPYG  VPMV+Y+CQ  HF
Sbjct: 228 CHPYGGNVPMVMYICQPVHF 247


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