BLASTX nr result

ID: Coptis21_contig00029894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029894
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274109.2| PREDICTED: ABC transporter G family member 1...    89   4e-16
emb|CAN64175.1| hypothetical protein VITISV_026307 [Vitis vinifera]    89   4e-16
emb|CBI17178.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002274038.1| PREDICTED: ABC transporter G family member 1...    87   1e-15
emb|CAN77224.1| hypothetical protein VITISV_002210 [Vitis vinifera]    87   1e-15

>ref|XP_002274109.2| PREDICTED: ABC transporter G family member 15 [Vitis vinifera]
          Length = 691

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/53 (81%), Positives = 46/53 (86%)
 Frame = -3

Query: 160 LIWEELNVVLNNSGKGPAKRLLNGLTGCAEPGRILGIMGPSGSGKSTLLDSLA 2
           L+WE+L VVL N GKGP KRLL GLTG AEPGRI+ IMGPSGSGKSTLLDSLA
Sbjct: 33  LVWEDLTVVLPNFGKGPTKRLLQGLTGYAEPGRIMAIMGPSGSGKSTLLDSLA 85


>emb|CAN64175.1| hypothetical protein VITISV_026307 [Vitis vinifera]
          Length = 450

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/53 (81%), Positives = 46/53 (86%)
 Frame = -3

Query: 160 LIWEELNVVLNNSGKGPAKRLLNGLTGCAEPGRILGIMGPSGSGKSTLLDSLA 2
           L+WE+L VVL N GKGP KRLL GLTG AEPGRI+ IMGPSGSGKSTLLDSLA
Sbjct: 13  LVWEDLTVVLPNFGKGPTKRLLQGLTGYAEPGRIMAIMGPSGSGKSTLLDSLA 65


>emb|CBI17178.3| unnamed protein product [Vitis vinifera]
          Length = 2144

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/53 (77%), Positives = 46/53 (86%)
 Frame = -3

Query: 160  LIWEELNVVLNNSGKGPAKRLLNGLTGCAEPGRILGIMGPSGSGKSTLLDSLA 2
            L+WE+L VVL N G GP KRLL+GL+GCAE GRI+ IMGPSGSGKSTLLDSLA
Sbjct: 1487 LVWEDLTVVLPNFGNGPTKRLLHGLSGCAEAGRIMAIMGPSGSGKSTLLDSLA 1539



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/53 (66%), Positives = 44/53 (83%)
 Frame = -3

Query: 160 LIWEELNVVLNNSGKGPAKRLLNGLTGCAEPGRILGIMGPSGSGKSTLLDSLA 2
           L+WE+L VV+ +   G  +RLL+G+TG AEPGRI+ +MGPSGSGKSTLLDSLA
Sbjct: 177 LVWEDLTVVVPSFRGGATRRLLHGVTGYAEPGRIMAVMGPSGSGKSTLLDSLA 229



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = -3

Query: 115 GPAKRLLNGLTGCAEPGRILGIMGPSGSGKSTLLDSLA 2
           GP +R+L GL+G AEPGR++ +MGPSGSGKSTLLDSLA
Sbjct: 853 GPTRRVLQGLSGYAEPGRLMAVMGPSGSGKSTLLDSLA 890


>ref|XP_002274038.1| PREDICTED: ABC transporter G family member 15 [Vitis vinifera]
          Length = 682

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/53 (77%), Positives = 46/53 (86%)
 Frame = -3

Query: 160 LIWEELNVVLNNSGKGPAKRLLNGLTGCAEPGRILGIMGPSGSGKSTLLDSLA 2
           L+WE+L VVL N G GP KRLL+GL+GCAE GRI+ IMGPSGSGKSTLLDSLA
Sbjct: 25  LVWEDLTVVLPNFGNGPTKRLLHGLSGCAEAGRIMAIMGPSGSGKSTLLDSLA 77


>emb|CAN77224.1| hypothetical protein VITISV_002210 [Vitis vinifera]
          Length = 682

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/53 (77%), Positives = 46/53 (86%)
 Frame = -3

Query: 160 LIWEELNVVLNNSGKGPAKRLLNGLTGCAEPGRILGIMGPSGSGKSTLLDSLA 2
           L+WE+L VVL N G GP KRLL+GL+GCAE GRI+ IMGPSGSGKSTLLDSLA
Sbjct: 25  LVWEDLTVVLPNFGNGPTKRLLHGLSGCAEAGRIMAIMGPSGSGKSTLLDSLA 77


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