BLASTX nr result

ID: Coptis21_contig00029888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029888
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37064.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_002274039.1| PREDICTED: probable calcium-activated outwar...    96   3e-18
emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]    96   3e-18
ref|XP_002515189.1| Calcium-activated outward-rectifying potassi...    91   1e-16
ref|XP_002320260.1| outward rectifying potassium channel [Populu...    88   6e-16

>emb|CBI37064.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/54 (81%), Positives = 52/54 (96%)
 Frame = -3

Query: 290 NNNGFISKSDYVIYKLKEMGKISEKDILQIGSQFNKLDPSNSGRITLPNLLESH 129
           NNNGFISKS+YVIYKLKEMGKI+E D+LQI +QFNKLDP+NSG+ITLP+LLE+H
Sbjct: 161 NNNGFISKSEYVIYKLKEMGKIAENDVLQICNQFNKLDPNNSGKITLPDLLENH 214


>ref|XP_002274039.1| PREDICTED: probable calcium-activated outward-rectifying potassium
           channel 5, chloroplastic [Vitis vinifera]
          Length = 390

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/54 (81%), Positives = 52/54 (96%)
 Frame = -3

Query: 290 NNNGFISKSDYVIYKLKEMGKISEKDILQIGSQFNKLDPSNSGRITLPNLLESH 129
           NNNGFISKS+YVIYKLKEMGKI+E D+LQI +QFNKLDP+NSG+ITLP+LLE+H
Sbjct: 336 NNNGFISKSEYVIYKLKEMGKIAENDVLQICNQFNKLDPNNSGKITLPDLLENH 389


>emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]
          Length = 390

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/54 (81%), Positives = 52/54 (96%)
 Frame = -3

Query: 290 NNNGFISKSDYVIYKLKEMGKISEKDILQIGSQFNKLDPSNSGRITLPNLLESH 129
           NNNGFISKS+YVIYKLKEMGKI+E D+LQI +QFNKLDP+NSG+ITLP+LLE+H
Sbjct: 336 NNNGFISKSEYVIYKLKEMGKIAENDVLQICNQFNKLDPNNSGKITLPDLLENH 389


>ref|XP_002515189.1| Calcium-activated outward-rectifying potassium channel, putative
           [Ricinus communis] gi|223545669|gb|EEF47173.1|
           Calcium-activated outward-rectifying potassium channel,
           putative [Ricinus communis]
          Length = 390

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/53 (81%), Positives = 50/53 (94%)
 Frame = -3

Query: 290 NNNGFISKSDYVIYKLKEMGKISEKDILQIGSQFNKLDPSNSGRITLPNLLES 132
           NNNGFISKS+YVIYKLKEMGKI EKDILQI +QF+KLDP+N G+ITLP+LLE+
Sbjct: 336 NNNGFISKSEYVIYKLKEMGKIGEKDILQICNQFSKLDPNNLGKITLPDLLEN 388


>ref|XP_002320260.1| outward rectifying potassium channel [Populus trichocarpa]
           gi|222861033|gb|EEE98575.1| outward rectifying potassium
           channel [Populus trichocarpa]
          Length = 318

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/51 (82%), Positives = 48/51 (94%)
 Frame = -3

Query: 290 NNNGFISKSDYVIYKLKEMGKISEKDILQIGSQFNKLDPSNSGRITLPNLL 138
           NNNGFISKS+YVIYKLKEMGKI EKDILQI +QF+KLDP+N G+ITLP+LL
Sbjct: 268 NNNGFISKSEYVIYKLKEMGKIGEKDILQICNQFSKLDPNNLGKITLPDLL 318


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