BLASTX nr result

ID: Coptis21_contig00029875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029875
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316801.1| predicted protein [Populus trichocarpa] gi|2...   142   5e-32
ref|XP_002523264.1| hypothetical protein RCOM_0649410 [Ricinus c...   140   1e-31
ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257...   135   4e-30
ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|2...   135   6e-30
ref|XP_002333950.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30

>ref|XP_002316801.1| predicted protein [Populus trichocarpa] gi|222859866|gb|EEE97413.1|
            predicted protein [Populus trichocarpa]
          Length = 773

 Score =  142 bits (357), Expect = 5e-32
 Identities = 83/153 (54%), Positives = 102/153 (66%), Gaps = 25/153 (16%)
 Frame = -3

Query: 487  LPDCLLMMLWEPKLSMEVSKETWVCSTDFIQRRPKQQ--IVHIDGGDESSR--SKDIK-- 326
            LPDCLL+M+ EPKLSMEVSKETWVCSTDFI+  P+    +   +G DE  +  S DIK  
Sbjct: 615  LPDCLLLMMCEPKLSMEVSKETWVCSTDFIRWLPEHSRPVSKTNGKDEPKKRVSIDIKPA 674

Query: 325  -------SSNPAQQLNQQSC-HPVP---------SMTTMIEQKLMNAVAYEPFVLTRCKS 197
                   +SN  QQ  + SC +P           SM+TMIEQKL+ A AYEPFVLTRCKS
Sbjct: 675  QVYNNGNNSNSLQQPRRSSCSYPAKPPARCAGTESMSTMIEQKLVGAKAYEPFVLTRCKS 734

Query: 196  EPLRTSARLVPEACSWKNRQLEP--PSYEAGVG 104
            EP+R++++L PEAC WKNR+LEP  P+   GVG
Sbjct: 735  EPMRSASKLAPEACFWKNRKLEPHRPAATLGVG 767


>ref|XP_002523264.1| hypothetical protein RCOM_0649410 [Ricinus communis]
            gi|223537477|gb|EEF39103.1| hypothetical protein
            RCOM_0649410 [Ricinus communis]
          Length = 731

 Score =  140 bits (354), Expect = 1e-31
 Identities = 85/165 (51%), Positives = 105/165 (63%), Gaps = 27/165 (16%)
 Frame = -3

Query: 514  KVHEKKKTELPDCLLMMLWEPKLSMEVSKETWVCSTDFIQRRPKQ----QIVHIDGGDES 347
            K  E ++  LPDCLL+M+ EPKLSMEVSKETWVCSTDFI+  P+     Q+   DGGD+ 
Sbjct: 567  KERENQQPLLPDCLLLMMCEPKLSMEVSKETWVCSTDFIRWLPEHSRPPQVKKRDGGDQP 626

Query: 346  SRSKDIKSS------NPAQQLNQQSC-HPVP---------SMTTMIEQKLMNAV-AYEPF 218
             +   I ++      NP QQ  + SC +P           SMTT IE+KL+    AYEPF
Sbjct: 627  KKRISIDNNPPSVQGNPPQQPPRSSCSYPAKPPSRAAGAESMTTAIERKLVGTTKAYEPF 686

Query: 217  VLTRCKSEPLRTSARLVPEACSWKNRQLEP--PSY----EAGVGF 101
            VLTRCKSEP+R++A+L PE C WKNRQLEP  P+      AGVGF
Sbjct: 687  VLTRCKSEPMRSAAKLAPEPCFWKNRQLEPHRPATLGVGAAGVGF 731


>ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257171 [Vitis vinifera]
          Length = 741

 Score =  135 bits (340), Expect = 4e-30
 Identities = 77/142 (54%), Positives = 94/142 (66%), Gaps = 13/142 (9%)
 Frame = -3

Query: 487  LPDCLLMMLWEPKLSMEVSKETWVCSTDFIQRRPKQQIVHIDGGDESSRSKDIKSSNPAQ 308
            LPDCLL+M+ EPKLSMEVSKETWV S DFI+  P +++V  + G +  +++    SNP Q
Sbjct: 601  LPDCLLLMMCEPKLSMEVSKETWVNSADFIRWHP-EKLVKPNNGQDQPKTRLSTDSNPTQ 659

Query: 307  QLNQQ----SCH------PVPSMTTMIEQKLMNAVAYEPFVLTRCKSEPLRTSARLVPEA 158
            Q   Q    SC          SM TMIEQK +NA AYEPFVLTRCKSEP+R+SA+L  +A
Sbjct: 660  QQLHQPPRSSCSFPAAAAAGASMATMIEQKFVNAAAYEPFVLTRCKSEPMRSSAKLASDA 719

Query: 157  CSWKNRQLEPPSYE---AGVGF 101
            C WKN +LEP       AGVGF
Sbjct: 720  CFWKNPKLEPHRPRVGAAGVGF 741


>ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|222847661|gb|EEE85208.1|
            predicted protein [Populus trichocarpa]
          Length = 730

 Score =  135 bits (339), Expect = 6e-30
 Identities = 77/165 (46%), Positives = 97/165 (58%), Gaps = 28/165 (16%)
 Frame = -3

Query: 514  KVHEKKKTELPDCLLMMLWEPKLSMEVSKETWVCSTDFIQRRPKQQ--IVHIDGGDESSR 341
            K  +  +  LPDCLL+M+ EPKLSMEVSKETWVC+TDFI+  P+    +   DG DE  +
Sbjct: 559  KKRDSSQPLLPDCLLLMMCEPKLSMEVSKETWVCTTDFIRWLPEHSRPVNKADGKDEPKK 618

Query: 340  SKDIKSSNPAQQLNQQSCHP--------------------------VPSMTTMIEQKLMN 239
               I  SNPAQ  N  S +                             SM+TMIEQKL+ 
Sbjct: 619  RASI-DSNPAQVHNSNSINNNNNNNLQQPARSSCSYPGKPPAHGAGTESMSTMIEQKLVG 677

Query: 238  AVAYEPFVLTRCKSEPLRTSARLVPEACSWKNRQLEPPSYEAGVG 104
            A AY+PFVLTRCKSEP+R++++L PEAC W NR+LEP    A +G
Sbjct: 678  ARAYDPFVLTRCKSEPMRSASKLAPEACFWMNRKLEPHGAAATLG 722


>ref|XP_002333950.1| predicted protein [Populus trichocarpa] gi|222839181|gb|EEE77532.1|
            predicted protein [Populus trichocarpa]
          Length = 730

 Score =  134 bits (338), Expect = 8e-30
 Identities = 77/165 (46%), Positives = 97/165 (58%), Gaps = 28/165 (16%)
 Frame = -3

Query: 514  KVHEKKKTELPDCLLMMLWEPKLSMEVSKETWVCSTDFIQRRPKQQ--IVHIDGGDESSR 341
            K  +  +  LPDCLL+M+ EPKLSMEVSKETWVC+TDFI+  P+    +   DG DE  +
Sbjct: 559  KERDSSQPLLPDCLLLMMREPKLSMEVSKETWVCTTDFIRWLPEHSRPVNKADGKDEPKK 618

Query: 340  SKDIKSSNPAQQLNQQSCHP--------------------------VPSMTTMIEQKLMN 239
               I  SNPAQ  N  S +                             SM+TMIEQKL+ 
Sbjct: 619  RASI-DSNPAQVHNSNSINNNNNNNLQQPARSSCSYPGKPPAHGAGTESMSTMIEQKLVG 677

Query: 238  AVAYEPFVLTRCKSEPLRTSARLVPEACSWKNRQLEPPSYEAGVG 104
            A AY+PFVLTRCKSEP+R++++L PEAC W NR+LEP    A +G
Sbjct: 678  ARAYDPFVLTRCKSEPMRSASKLAPEACFWMNRKLEPHGAAATLG 722


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