BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029870
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22720.3| unnamed protein product [Vitis vinifera]              201   7e-50
emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]   192   2e-47
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   190   1e-46
emb|CBI26210.3| unnamed protein product [Vitis vinifera]              182   3e-44
emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera]   181   4e-44

>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  201 bits (510), Expect = 7e-50
 Identities = 101/152 (66%), Positives = 121/152 (79%)
 Frame = +1

Query: 16  MVVQNGIKLAVNLISTHFGDLVTKVCECLLRKGTLTLQEIIGYTELSSQQVKNCLLVLIQ 195
           M  Q G++LAV+LIS+HFG+LV KVC+CLLRKGTLTL  +I +TEL  QQVK+C+LVLIQ
Sbjct: 1   MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 196 HNCVHAFTYNNEDGQEGNVPKGTTQYTAVFENIVHRMRFPKFLAIVSEELDKECEELFQG 375
           HNCV AF    E G  G  P+  TQY A+F NI+HRMRF KFLAIVSEELDKECEE+ +G
Sbjct: 61  HNCVQAFAIQQEVGF-GEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEG 119

Query: 376 LLQHGRLTVEQIILRAISKRNEGGCAVQDAIR 471
           LLQHGRLT+EQI+ RA S ++EG   VQDA+R
Sbjct: 120 LLQHGRLTLEQILDRAKSNQSEGEPVVQDALR 151


>emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]
          Length = 721

 Score =  192 bits (488), Expect = 2e-47
 Identities = 99/152 (65%), Positives = 118/152 (77%)
 Frame = +1

Query: 16  MVVQNGIKLAVNLISTHFGDLVTKVCECLLRKGTLTLQEIIGYTELSSQQVKNCLLVLIQ 195
           M  Q G++LAV+LIS+HFG+LV KVC+CLLRKGT TL  +I +TEL  QQVK+C+LVLIQ
Sbjct: 1   MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTXTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 196 HNCVHAFTYNNEDGQEGNVPKGTTQYTAVFENIVHRMRFPKFLAIVSEELDKECEELFQG 375
           HNCV AF    E G  G  P+  TQY A+F NI+HRMRF KFLAIVSEELDKECEE+ +G
Sbjct: 61  HNCVQAFAIQQEVG-FGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEG 119

Query: 376 LLQHGRLTVEQIILRAISKRNEGGCAVQDAIR 471
           LLQHGRLT+EQI+ RA  K N+    VQDA+R
Sbjct: 120 LLQHGRLTLEQILDRA--KSNQREPVVQDALR 149


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
           vinifera]
          Length = 511

 Score =  190 bits (482), Expect = 1e-46
 Identities = 98/152 (64%), Positives = 117/152 (76%)
 Frame = +1

Query: 16  MVVQNGIKLAVNLISTHFGDLVTKVCECLLRKGTLTLQEIIGYTELSSQQVKNCLLVLIQ 195
           M  Q G++LAV+LIS+HFG+LV KVC+CLLRKGTLTL  +I +TEL  QQVK+C+LVLIQ
Sbjct: 1   MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 196 HNCVHAFTYNNEDGQEGNVPKGTTQYTAVFENIVHRMRFPKFLAIVSEELDKECEELFQG 375
           HNCV AF    E       P+  TQY A+F NI+HRMRF KFLAIVSEELDKECEE+ +G
Sbjct: 61  HNCVQAFAIQQE------APRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEG 114

Query: 376 LLQHGRLTVEQIILRAISKRNEGGCAVQDAIR 471
           LLQHGRLT+EQI+ RA  K N+    VQDA+R
Sbjct: 115 LLQHGRLTLEQILDRA--KSNQREPVVQDALR 144


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  182 bits (461), Expect = 3e-44
 Identities = 94/152 (61%), Positives = 112/152 (73%)
 Frame = +1

Query: 16  MVVQNGIKLAVNLISTHFGDLVTKVCECLLRKGTLTLQEIIGYTELSSQQVKNCLLVLIQ 195
           M  + GIKLAV+LIST FGD   KVC+CLLRKGTL L +I+   +LS QQVK  L VLIQ
Sbjct: 1   MTPEYGIKLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQ 60

Query: 196 HNCVHAFTYNNEDGQEGNVPKGTTQYTAVFENIVHRMRFPKFLAIVSEELDKECEELFQG 375
           HNCV AF   +E G  G  P   TQY  +F+NI+HRMRFPK LAIVS+ELDKECEELF+ 
Sbjct: 61  HNCVQAFAMEHEGGC-GEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEA 119

Query: 376 LLQHGRLTVEQIILRAISKRNEGGCAVQDAIR 471
            L+HG LT++QI+ R  S +NEG C VQDA+R
Sbjct: 120 FLKHGWLTLQQILDRVPSNQNEGNCTVQDALR 151


>emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera]
          Length = 549

 Score =  181 bits (460), Expect = 4e-44
 Identities = 93/152 (61%), Positives = 113/152 (74%)
 Frame = +1

Query: 16  MVVQNGIKLAVNLISTHFGDLVTKVCECLLRKGTLTLQEIIGYTELSSQQVKNCLLVLIQ 195
           M  + GIKLAV+LIST FGD   KVC+CL+RKGTL L +I+  T+LS QQVK  L VLIQ
Sbjct: 1   MTPEYGIKLAVHLISTDFGDHAAKVCDCLIRKGTLALDDIVRTTKLSPQQVKTYLKVLIQ 60

Query: 196 HNCVHAFTYNNEDGQEGNVPKGTTQYTAVFENIVHRMRFPKFLAIVSEELDKECEELFQG 375
           HNCV AF   +E G  G  P   TQY  +F+NI+HRMRFPK LAIVS+ELDKECE+LF+ 
Sbjct: 61  HNCVQAFAMEHEGGC-GEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEKLFEA 119

Query: 376 LLQHGRLTVEQIILRAISKRNEGGCAVQDAIR 471
            L+HG LT++QI+ R  S +NEG C VQDA+R
Sbjct: 120 FLKHGWLTLQQILDRVPSNQNEGNCTVQDALR 151