BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029862
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_003622120.1| Pentatricopeptide repeat-containing protein ...    59   5e-07
ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002298642.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_003622123.1| Pentatricopeptide repeat-containing protein ...    57   2e-06

>ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Glycine max]
          Length = 647

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/39 (64%), Positives = 33/39 (84%)
 Frame = +2

Query: 164 ANGCCGNLKTYNILIRKLSKMGEVEEARCLFNHMLENGL 280
           ++GCCGNLKTYNILI+K S++G+ EEA  LF HML+ G+
Sbjct: 457 SSGCCGNLKTYNILIQKFSEVGQAEEAHMLFYHMLDKGV 495


>ref|XP_003622120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355497135|gb|AES78338.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 894

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +2

Query: 164 ANGCCGNLKTYNILIRKLSKMGEVEEARCLFNHMLENGL 280
           A+GCCGNLKTYN+LI K  K G +EEAR LFN M++ G+
Sbjct: 672 ASGCCGNLKTYNVLIHKFLKEGLIEEARTLFNRMVDKGV 710


>ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|222869847|gb|EEF06978.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = +2

Query: 170 GCCGNLKTYNILIRKLSKMGEVEEARCLFNHMLENGL 280
           GC GNLKTYNILI K S++G++EEA  LFNHMLE G+
Sbjct: 463 GCGGNLKTYNILIGKFSEIGQIEEATRLFNHMLEKGV 499


>ref|XP_002298642.1| predicted protein [Populus trichocarpa] gi|222845900|gb|EEE83447.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = +2

Query: 170 GCCGNLKTYNILIRKLSKMGEVEEARCLFNHMLENGL 280
           GC GNLKTYNILI K S++G++EEA  LFNHMLE G+
Sbjct: 463 GCGGNLKTYNILIGKFSEIGQIEEATRLFNHMLEKGV 499


>ref|XP_003622123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355497138|gb|AES78341.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 495

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = +2

Query: 164 ANGCCGNLKTYNILIRKLSKMGEVEEARCLFNHMLENGL 280
           A+GCCGNLKTYN+LI K  + G +EEAR LFN M++ G+
Sbjct: 299 ASGCCGNLKTYNVLIHKFLEEGLIEEARTLFNRMVDKGV 337