BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029857
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518043.1| conserved hypothetical protein [Ricinus comm...    75   7e-12
ref|XP_002885604.1| hypothetical protein ARALYDRAFT_342541 [Arab...    71   1e-10
ref|NP_189033.1| uncharacterized protein [Arabidopsis thaliana] ...    71   1e-10
ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcript...    70   2e-10
ref|NP_001154643.1| RNA-directed DNA polymerase (reverse transcr...    70   2e-10

>ref|XP_002518043.1| conserved hypothetical protein [Ricinus communis]
           gi|223542639|gb|EEF44176.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 415

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/72 (51%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
 Frame = -3

Query: 278 GIDAFIKLPHNWPIVNSTLKLISLKCQNNRKKKLSLS-SGQVEELLSSMDVQAQQNLLNF 102
           G+DAFIKL   WP+  S LKLISLK  N+  K++SLS   +VEE+++S+D+Q + NLL+F
Sbjct: 332 GVDAFIKLSQGWPVSRSPLKLISLKSSNHHSKEISLSFLCRVEEVVNSLDIQMRLNLLSF 391

Query: 101 VDAIEELLAKRI 66
           V+ IE+LL +++
Sbjct: 392 VEVIEKLLVEQM 403


>ref|XP_002885604.1| hypothetical protein ARALYDRAFT_342541 [Arabidopsis lyrata subsp.
           lyrata] gi|297331444|gb|EFH61863.1| hypothetical protein
           ARALYDRAFT_342541 [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/71 (49%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
 Frame = -3

Query: 278 GIDAFIKLPHNWPIVNSTLKLISLKCQNNRKKKLSLS-SGQVEELLSSMDVQAQQNLLNF 102
           GIDAF+K+ + WP++N+ LKL SLK  +N+ K +SLS   +VE+L +S+D+Q +QNL  F
Sbjct: 337 GIDAFLKVSNGWPLLNTPLKLESLKNSDNQSKGISLSLICKVEDLANSLDLQTRQNLSGF 396

Query: 101 VDAIEELLAKR 69
           +DAIE++L ++
Sbjct: 397 MDAIEKILVQQ 407


>ref|NP_189033.1| uncharacterized protein [Arabidopsis thaliana]
           gi|1742965|emb|CAA70756.1| HAPp48,5 protein [Arabidopsis
           thaliana] gi|9294659|dbj|BAB03008.1| HAPp48,5 protein
           [Arabidopsis thaliana] gi|20259510|gb|AAM13875.1|
           putative HAPp48,5 protein [Arabidopsis thaliana]
           gi|21436469|gb|AAM51435.1| putative HAPp48,5 protein
           [Arabidopsis thaliana] gi|332643310|gb|AEE76831.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 421

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/71 (49%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
 Frame = -3

Query: 278 GIDAFIKLPHNWPIVNSTLKLISLKCQNNRKKKLSLS-SGQVEELLSSMDVQAQQNLLNF 102
           GIDAF+K+   WP++N+ LKL SLK  +N+ K +SLS   +VEEL +S+D++ +QNL  F
Sbjct: 338 GIDAFLKVSDGWPLLNTPLKLASLKNSDNQSKGISLSLICKVEELANSLDLETRQNLSGF 397

Query: 101 VDAIEELLAKR 69
           +DAIE++L ++
Sbjct: 398 MDAIEKILVEQ 408


>ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcriptase)-related protein
           [Arabidopsis thaliana] gi|332643359|gb|AEE76880.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related protein [Arabidopsis thaliana]
          Length = 746

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/71 (46%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
 Frame = -3

Query: 278 GIDAFIKLPHNWPIVNSTLKLISLKCQNNRKKKLSLS-SGQVEELLSSMDVQAQQNLLNF 102
           GIDAF+K+   WP++N+ LKL SLK  +N+ K  SLS   ++EEL +S+D++ +QNL  F
Sbjct: 663 GIDAFLKVSDGWPLLNTPLKLASLKNSDNQSKGFSLSLISKLEELANSLDLETRQNLSGF 722

Query: 101 VDAIEELLAKR 69
           +DA+E++L ++
Sbjct: 723 MDAVEKILVQQ 733


>ref|NP_001154643.1| RNA-directed DNA polymerase (reverse transcriptase)-related protein
           [Arabidopsis thaliana] gi|332643360|gb|AEE76881.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related protein [Arabidopsis thaliana]
          Length = 428

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/71 (46%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
 Frame = -3

Query: 278 GIDAFIKLPHNWPIVNSTLKLISLKCQNNRKKKLSLS-SGQVEELLSSMDVQAQQNLLNF 102
           GIDAF+K+   WP++N+ LKL SLK  +N+ K  SLS   ++EEL +S+D++ +QNL  F
Sbjct: 345 GIDAFLKVSDGWPLLNTPLKLASLKNSDNQSKGFSLSLISKLEELANSLDLETRQNLSGF 404

Query: 101 VDAIEELLAKR 69
           +DA+E++L ++
Sbjct: 405 MDAVEKILVQQ 415