BLASTX nr result

ID: Coptis21_contig00029854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029854
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252...    89   3e-16
ref|XP_002276393.1| PREDICTED: uncharacterized protein LOC100240...    88   8e-16
emb|CAN78550.1| hypothetical protein VITISV_003242 [Vitis vinifera]    88   8e-16
ref|XP_002317871.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002271703.2| PREDICTED: uncharacterized protein LOC100261...    85   7e-15

>ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252260 [Vitis vinifera]
          Length = 365

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/104 (40%), Positives = 62/104 (59%)
 Frame = +2

Query: 38  PKIQILRDHGVPDSNISRFISIEFRHLGVKNNDFNDAVKEVIAMGIGPSSKGFAHALCTV 217
           P I+ LR HGVP+SNI R + +  R L    ++F   +K V  MG       F H +C +
Sbjct: 170 PNIETLRSHGVPESNILRMLILRPRTLSFNADEFKAILKRVKEMGFDEKGMMFIHGMCAL 229

Query: 218 SGMTKAKREAKMGIYKSFGWSDEEILLAFRRQPICLSISEEKLR 349
            GM KAK E+K+ +++SFGW +EE +  F +QP  +S SE ++R
Sbjct: 230 CGMKKAKWESKVSVFRSFGWGEEEFIALFVKQPQFMSNSETRIR 273


>ref|XP_002276393.1| PREDICTED: uncharacterized protein LOC100240766 [Vitis vinifera]
          Length = 384

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/114 (38%), Positives = 70/114 (61%)
 Frame = +2

Query: 5   ILRLEPQKFLEPKIQILRDHGVPDSNISRFISIEFRHLGVKNNDFNDAVKEVIAMGIGPS 184
           +L + P   +E  I  L++ GVP SNI+  +S++ R   V+ N F + ++EV  MG  PS
Sbjct: 178 VLIVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFREILEEVKKMGFDPS 237

Query: 185 SKGFAHALCTVSGMTKAKREAKMGIYKSFGWSDEEILLAFRRQPICLSISEEKL 346
              F  A+  ++GM+K+  E K+  YK +GWS+E+I LAF + P C+  SE+K+
Sbjct: 238 KTRFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSPWCMIYSEDKI 291


>emb|CAN78550.1| hypothetical protein VITISV_003242 [Vitis vinifera]
          Length = 384

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/114 (38%), Positives = 70/114 (61%)
 Frame = +2

Query: 5   ILRLEPQKFLEPKIQILRDHGVPDSNISRFISIEFRHLGVKNNDFNDAVKEVIAMGIGPS 184
           +L + P   +E  I  L++ GVP SNI+  +S++ R   V+ N F + ++EV  MG  PS
Sbjct: 178 VLIVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFREILEEVKKMGFDPS 237

Query: 185 SKGFAHALCTVSGMTKAKREAKMGIYKSFGWSDEEILLAFRRQPICLSISEEKL 346
              F  A+  ++GM+K+  E K+  YK +GWS+E+I LAF + P C+  SE+K+
Sbjct: 238 KTRFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSPWCMIYSEDKI 291


>ref|XP_002317871.1| predicted protein [Populus trichocarpa] gi|222858544|gb|EEE96091.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/114 (38%), Positives = 68/114 (59%)
 Frame = +2

Query: 5   ILRLEPQKFLEPKIQILRDHGVPDSNISRFISIEFRHLGVKNNDFNDAVKEVIAMGIGPS 184
           I+   P+ +L+P + ILR++G+P S+I+  I    R +      F + V+ V  MG  PS
Sbjct: 183 IIYHRPESYLQPYVSILRENGIPKSHIASLIYKWPRTVRACPIRFRNTVETVKEMGFDPS 242

Query: 185 SKGFAHALCTVSGMTKAKREAKMGIYKSFGWSDEEILLAFRRQPICLSISEEKL 346
              F  A+   S  +K+  E K+G+YK +GWSDEE+L AF+R P C+  SE+K+
Sbjct: 243 KLVFTLAVLARSAQSKSGWEKKVGVYKRWGWSDEEVLAAFKRNPWCMMSSEDKI 296


>ref|XP_002271703.2| PREDICTED: uncharacterized protein LOC100261677 [Vitis vinifera]
          Length = 411

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/108 (38%), Positives = 70/108 (64%)
 Frame = +2

Query: 23  QKFLEPKIQILRDHGVPDSNISRFISIEFRHLGVKNNDFNDAVKEVIAMGIGPSSKGFAH 202
           ++ +   I +LR+ GVP S+IS F+   +  +G +++ F++ VK V+ MG  P    F +
Sbjct: 168 ERTIAANIAVLREIGVPISHIS-FLVARYHSIGQRSDKFSENVKTVVEMGFNPLKFTFLN 226

Query: 203 ALCTVSGMTKAKREAKMGIYKSFGWSDEEILLAFRRQPICLSISEEKL 346
           AL +   MT++ R+ KM +Y+ +GWS++EILLAFR  P C+ +SE K+
Sbjct: 227 ALQSFCQMTESTRQQKMEMYRGWGWSEDEILLAFRTCPQCMQLSENKV 274


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