BLASTX nr result
ID: Coptis21_contig00029852
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00029852 (273 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABA55807.1| chloroplast omega-3 fatty acid desaturase precurs... 171 7e-41 gb|AEK06372.1| plastid omega-3 desaturase FAD7/8 [Carthamus tinc... 168 4e-40 gb|ADR80039.1| plastid fatty acid desaturase [Carthamus tinctorius] 168 4e-40 gb|AEK06371.1| plastid omega-3 desaturase FAD7/8 [Carthamus tinc... 166 2e-39 ref|XP_002309146.1| predicted protein [Populus trichocarpa] gi|2... 166 2e-39 >gb|ABA55807.1| chloroplast omega-3 fatty acid desaturase precursor [Crepis alpina] Length = 438 Score = 171 bits (432), Expect = 7e-41 Identities = 75/91 (82%), Positives = 84/91 (92%) Frame = +1 Query: 1 YVLRDVMVVFLLAAIASYFDNVVVWLFYWAAQGTMFWAMFVLGHDCGHGSFSDNQKLNSL 180 YV+RDV+VVF LAA+A+YF+N+VVW YWAAQGTMFWA+FVLGHDCGHGSFS+N KLNS+ Sbjct: 116 YVVRDVVVVFGLAAVAAYFNNMVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNAKLNSV 175 Query: 181 VGHFLHSFILVPYHGWRISHRTHHQNQGHVE 273 VGH LHS ILVPYHGWRISHRTHHQN GHVE Sbjct: 176 VGHLLHSSILVPYHGWRISHRTHHQNHGHVE 206 >gb|AEK06372.1| plastid omega-3 desaturase FAD7/8 [Carthamus tinctorius] Length = 440 Score = 168 bits (426), Expect = 4e-40 Identities = 74/91 (81%), Positives = 83/91 (91%) Frame = +1 Query: 1 YVLRDVMVVFLLAAIASYFDNVVVWLFYWAAQGTMFWAMFVLGHDCGHGSFSDNQKLNSL 180 YV+RDV+VVF LAA+A+YF+N+VVW YW AQGTMFWA+FVLGHDCGHGSFS+N KLNS+ Sbjct: 121 YVVRDVVVVFGLAAVAAYFNNMVVWPLYWFAQGTMFWALFVLGHDCGHGSFSNNAKLNSV 180 Query: 181 VGHFLHSFILVPYHGWRISHRTHHQNQGHVE 273 VGH LHS ILVPYHGWRISHRTHHQN GHVE Sbjct: 181 VGHLLHSSILVPYHGWRISHRTHHQNHGHVE 211 >gb|ADR80039.1| plastid fatty acid desaturase [Carthamus tinctorius] Length = 440 Score = 168 bits (426), Expect = 4e-40 Identities = 74/91 (81%), Positives = 83/91 (91%) Frame = +1 Query: 1 YVLRDVMVVFLLAAIASYFDNVVVWLFYWAAQGTMFWAMFVLGHDCGHGSFSDNQKLNSL 180 YV+RDV+VVF LAA+A+YF+N+VVW YW AQGTMFWA+FVLGHDCGHGSFS+N KLNS+ Sbjct: 121 YVVRDVVVVFGLAAVAAYFNNMVVWPLYWFAQGTMFWALFVLGHDCGHGSFSNNAKLNSV 180 Query: 181 VGHFLHSFILVPYHGWRISHRTHHQNQGHVE 273 VGH LHS ILVPYHGWRISHRTHHQN GHVE Sbjct: 181 VGHLLHSSILVPYHGWRISHRTHHQNHGHVE 211 >gb|AEK06371.1| plastid omega-3 desaturase FAD7/8 [Carthamus tinctorius] Length = 441 Score = 166 bits (419), Expect = 2e-39 Identities = 73/91 (80%), Positives = 81/91 (89%) Frame = +1 Query: 1 YVLRDVMVVFLLAAIASYFDNVVVWLFYWAAQGTMFWAMFVLGHDCGHGSFSDNQKLNSL 180 YV+RDV+VVF LAA+A+YF+N+VVW YW AQ TMFWA+FVLGHDCGHGSFS+N KLNS Sbjct: 123 YVVRDVVVVFGLAAVAAYFNNMVVWPLYWIAQSTMFWALFVLGHDCGHGSFSNNGKLNSF 182 Query: 181 VGHFLHSFILVPYHGWRISHRTHHQNQGHVE 273 VGH LHS ILVPYHGWRISHRTHHQN GHVE Sbjct: 183 VGHLLHSSILVPYHGWRISHRTHHQNHGHVE 213 >ref|XP_002309146.1| predicted protein [Populus trichocarpa] gi|222855122|gb|EEE92669.1| predicted protein [Populus trichocarpa] Length = 451 Score = 166 bits (419), Expect = 2e-39 Identities = 74/91 (81%), Positives = 80/91 (87%) Frame = +1 Query: 1 YVLRDVMVVFLLAAIASYFDNVVVWLFYWAAQGTMFWAMFVLGHDCGHGSFSDNQKLNSL 180 YV+RDV VVF LAA A+YF+N VVW YWAAQGTMFWA+FVLGHDCGHGSFS+N KLNS+ Sbjct: 128 YVVRDVAVVFGLAAAAAYFNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNNKLNSV 187 Query: 181 VGHFLHSFILVPYHGWRISHRTHHQNQGHVE 273 GH LHS ILVPYHGWRISHRTHHQN GHVE Sbjct: 188 AGHILHSSILVPYHGWRISHRTHHQNHGHVE 218