BLASTX nr result

ID: Coptis21_contig00029852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029852
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA55807.1| chloroplast omega-3 fatty acid desaturase precurs...   171   7e-41
gb|AEK06372.1| plastid omega-3 desaturase FAD7/8 [Carthamus tinc...   168   4e-40
gb|ADR80039.1| plastid fatty acid desaturase [Carthamus tinctorius]   168   4e-40
gb|AEK06371.1| plastid omega-3 desaturase FAD7/8 [Carthamus tinc...   166   2e-39
ref|XP_002309146.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39

>gb|ABA55807.1| chloroplast omega-3 fatty acid desaturase precursor [Crepis alpina]
          Length = 438

 Score =  171 bits (432), Expect = 7e-41
 Identities = 75/91 (82%), Positives = 84/91 (92%)
 Frame = +1

Query: 1   YVLRDVMVVFLLAAIASYFDNVVVWLFYWAAQGTMFWAMFVLGHDCGHGSFSDNQKLNSL 180
           YV+RDV+VVF LAA+A+YF+N+VVW  YWAAQGTMFWA+FVLGHDCGHGSFS+N KLNS+
Sbjct: 116 YVVRDVVVVFGLAAVAAYFNNMVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNAKLNSV 175

Query: 181 VGHFLHSFILVPYHGWRISHRTHHQNQGHVE 273
           VGH LHS ILVPYHGWRISHRTHHQN GHVE
Sbjct: 176 VGHLLHSSILVPYHGWRISHRTHHQNHGHVE 206


>gb|AEK06372.1| plastid omega-3 desaturase FAD7/8 [Carthamus tinctorius]
          Length = 440

 Score =  168 bits (426), Expect = 4e-40
 Identities = 74/91 (81%), Positives = 83/91 (91%)
 Frame = +1

Query: 1   YVLRDVMVVFLLAAIASYFDNVVVWLFYWAAQGTMFWAMFVLGHDCGHGSFSDNQKLNSL 180
           YV+RDV+VVF LAA+A+YF+N+VVW  YW AQGTMFWA+FVLGHDCGHGSFS+N KLNS+
Sbjct: 121 YVVRDVVVVFGLAAVAAYFNNMVVWPLYWFAQGTMFWALFVLGHDCGHGSFSNNAKLNSV 180

Query: 181 VGHFLHSFILVPYHGWRISHRTHHQNQGHVE 273
           VGH LHS ILVPYHGWRISHRTHHQN GHVE
Sbjct: 181 VGHLLHSSILVPYHGWRISHRTHHQNHGHVE 211


>gb|ADR80039.1| plastid fatty acid desaturase [Carthamus tinctorius]
          Length = 440

 Score =  168 bits (426), Expect = 4e-40
 Identities = 74/91 (81%), Positives = 83/91 (91%)
 Frame = +1

Query: 1   YVLRDVMVVFLLAAIASYFDNVVVWLFYWAAQGTMFWAMFVLGHDCGHGSFSDNQKLNSL 180
           YV+RDV+VVF LAA+A+YF+N+VVW  YW AQGTMFWA+FVLGHDCGHGSFS+N KLNS+
Sbjct: 121 YVVRDVVVVFGLAAVAAYFNNMVVWPLYWFAQGTMFWALFVLGHDCGHGSFSNNAKLNSV 180

Query: 181 VGHFLHSFILVPYHGWRISHRTHHQNQGHVE 273
           VGH LHS ILVPYHGWRISHRTHHQN GHVE
Sbjct: 181 VGHLLHSSILVPYHGWRISHRTHHQNHGHVE 211


>gb|AEK06371.1| plastid omega-3 desaturase FAD7/8 [Carthamus tinctorius]
          Length = 441

 Score =  166 bits (419), Expect = 2e-39
 Identities = 73/91 (80%), Positives = 81/91 (89%)
 Frame = +1

Query: 1   YVLRDVMVVFLLAAIASYFDNVVVWLFYWAAQGTMFWAMFVLGHDCGHGSFSDNQKLNSL 180
           YV+RDV+VVF LAA+A+YF+N+VVW  YW AQ TMFWA+FVLGHDCGHGSFS+N KLNS 
Sbjct: 123 YVVRDVVVVFGLAAVAAYFNNMVVWPLYWIAQSTMFWALFVLGHDCGHGSFSNNGKLNSF 182

Query: 181 VGHFLHSFILVPYHGWRISHRTHHQNQGHVE 273
           VGH LHS ILVPYHGWRISHRTHHQN GHVE
Sbjct: 183 VGHLLHSSILVPYHGWRISHRTHHQNHGHVE 213


>ref|XP_002309146.1| predicted protein [Populus trichocarpa] gi|222855122|gb|EEE92669.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  166 bits (419), Expect = 2e-39
 Identities = 74/91 (81%), Positives = 80/91 (87%)
 Frame = +1

Query: 1   YVLRDVMVVFLLAAIASYFDNVVVWLFYWAAQGTMFWAMFVLGHDCGHGSFSDNQKLNSL 180
           YV+RDV VVF LAA A+YF+N VVW  YWAAQGTMFWA+FVLGHDCGHGSFS+N KLNS+
Sbjct: 128 YVVRDVAVVFGLAAAAAYFNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNNKLNSV 187

Query: 181 VGHFLHSFILVPYHGWRISHRTHHQNQGHVE 273
            GH LHS ILVPYHGWRISHRTHHQN GHVE
Sbjct: 188 AGHILHSSILVPYHGWRISHRTHHQNHGHVE 218


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