BLASTX nr result
ID: Coptis21_contig00029840
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00029840 (384 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI17036.3| unnamed protein product [Vitis vinifera] 93 3e-17 ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containin... 92 4e-17 emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera] 92 4e-17 emb|CBI26086.3| unnamed protein product [Vitis vinifera] 87 1e-15 emb|CAN75599.1| hypothetical protein VITISV_025756 [Vitis vinifera] 87 2e-15 >emb|CBI17036.3| unnamed protein product [Vitis vinifera] Length = 157 Score = 92.8 bits (229), Expect = 3e-17 Identities = 37/91 (40%), Positives = 55/91 (60%) Frame = +3 Query: 78 KKRLIELCLREVNTCGYQGNSLKSVSWDRIKKEIHKEFGLIFKQKDIKNKWDYLRKSYQA 257 +K I+LCL+E N G LKS +W RI +E+ K G + K +KN WDY+++ Y Sbjct: 34 RKHFIDLCLQEANKGFRSGGGLKSSAWPRIAEELEKLLGKCYTSKQLKNGWDYMKRQYLI 93 Query: 258 WKYLLNKTGHEYNATTVTFDWPQSVWDDVIR 350 W ++ TGH YN+ T TFDWP W++ ++ Sbjct: 94 WSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQ 124 >ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containing protein 43-like [Vitis vinifera] gi|297739472|emb|CBI29654.3| unnamed protein product [Vitis vinifera] Length = 299 Score = 92.0 bits (227), Expect = 4e-17 Identities = 37/91 (40%), Positives = 55/91 (60%) Frame = +3 Query: 78 KKRLIELCLREVNTCGYQGNSLKSVSWDRIKKEIHKEFGLIFKQKDIKNKWDYLRKSYQA 257 +K I+LCL+E N LKS +W RI +E+ K G F K +KN+WDY+++ Y Sbjct: 46 RKHFIDLCLQEANKGFRSSGGLKSSAWPRIAEELEKLLGKRFTSKQLKNEWDYMKRQYLI 105 Query: 258 WKYLLNKTGHEYNATTVTFDWPQSVWDDVIR 350 W ++ TGH YN+ T TFDWP W++ ++ Sbjct: 106 WSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQ 136 >emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera] Length = 596 Score = 92.0 bits (227), Expect = 4e-17 Identities = 37/91 (40%), Positives = 55/91 (60%) Frame = +3 Query: 78 KKRLIELCLREVNTCGYQGNSLKSVSWDRIKKEIHKEFGLIFKQKDIKNKWDYLRKSYQA 257 +K I+LCL+E N G LKS +W RI +E+ K G + K +KN WDY+++ Y Sbjct: 18 RKHFIDLCLQEANKGFRSGGGLKSSAWPRIAEELEKLLGKRYTSKQLKNGWDYMKRQYLI 77 Query: 258 WKYLLNKTGHEYNATTVTFDWPQSVWDDVIR 350 W ++ TGH YN+ T TFDWP W++ ++ Sbjct: 78 WSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQ 108 >emb|CBI26086.3| unnamed protein product [Vitis vinifera] Length = 228 Score = 87.4 bits (215), Expect = 1e-15 Identities = 39/91 (42%), Positives = 53/91 (58%) Frame = +3 Query: 78 KKRLIELCLREVNTCGYQGNSLKSVSWDRIKKEIHKEFGLIFKQKDIKNKWDYLRKSYQA 257 +K I+LCL E N+ G +LK SW RI KE+ K G F QK +KN WDY++K Y Sbjct: 38 RKHFIDLCLHEANSGFRSGGTLKPSSWPRIIKELEKLVGKRFNQKQLKNAWDYMKKQYLT 97 Query: 258 WKYLLNKTGHEYNATTVTFDWPQSVWDDVIR 350 W L+ G YN+ T TFD P W++ ++ Sbjct: 98 WSRLITMMGDGYNSVTKTFDLPTERWEEYLQ 128 >emb|CAN75599.1| hypothetical protein VITISV_025756 [Vitis vinifera] Length = 251 Score = 86.7 bits (213), Expect = 2e-15 Identities = 36/91 (39%), Positives = 54/91 (59%) Frame = +3 Query: 78 KKRLIELCLREVNTCGYQGNSLKSVSWDRIKKEIHKEFGLIFKQKDIKNKWDYLRKSYQA 257 +K I+LCL+E N G LKS +W RI +E+ K G + K +KN DY+++ Y Sbjct: 18 RKHFIDLCLQEANKGFRXGGGLKSSAWPRIAEELEKLLGKRYTSKQLKNGXDYMKRQYLI 77 Query: 258 WKYLLNKTGHEYNATTVTFDWPQSVWDDVIR 350 W ++ TGH YN+ T TFDWP W++ ++ Sbjct: 78 WXKMMTMTGHGYNSVTKTFDWPAEKWEEYLQ 108