BLASTX nr result

ID: Coptis21_contig00029840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029840
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17036.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containin...    92   4e-17
emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]    92   4e-17
emb|CBI26086.3| unnamed protein product [Vitis vinifera]               87   1e-15
emb|CAN75599.1| hypothetical protein VITISV_025756 [Vitis vinifera]    87   2e-15

>emb|CBI17036.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 37/91 (40%), Positives = 55/91 (60%)
 Frame = +3

Query: 78  KKRLIELCLREVNTCGYQGNSLKSVSWDRIKKEIHKEFGLIFKQKDIKNKWDYLRKSYQA 257
           +K  I+LCL+E N     G  LKS +W RI +E+ K  G  +  K +KN WDY+++ Y  
Sbjct: 34  RKHFIDLCLQEANKGFRSGGGLKSSAWPRIAEELEKLLGKCYTSKQLKNGWDYMKRQYLI 93

Query: 258 WKYLLNKTGHEYNATTVTFDWPQSVWDDVIR 350
           W  ++  TGH YN+ T TFDWP   W++ ++
Sbjct: 94  WSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQ 124


>ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Vitis vinifera] gi|297739472|emb|CBI29654.3| unnamed
           protein product [Vitis vinifera]
          Length = 299

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 37/91 (40%), Positives = 55/91 (60%)
 Frame = +3

Query: 78  KKRLIELCLREVNTCGYQGNSLKSVSWDRIKKEIHKEFGLIFKQKDIKNKWDYLRKSYQA 257
           +K  I+LCL+E N        LKS +W RI +E+ K  G  F  K +KN+WDY+++ Y  
Sbjct: 46  RKHFIDLCLQEANKGFRSSGGLKSSAWPRIAEELEKLLGKRFTSKQLKNEWDYMKRQYLI 105

Query: 258 WKYLLNKTGHEYNATTVTFDWPQSVWDDVIR 350
           W  ++  TGH YN+ T TFDWP   W++ ++
Sbjct: 106 WSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQ 136


>emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]
          Length = 596

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 37/91 (40%), Positives = 55/91 (60%)
 Frame = +3

Query: 78  KKRLIELCLREVNTCGYQGNSLKSVSWDRIKKEIHKEFGLIFKQKDIKNKWDYLRKSYQA 257
           +K  I+LCL+E N     G  LKS +W RI +E+ K  G  +  K +KN WDY+++ Y  
Sbjct: 18  RKHFIDLCLQEANKGFRSGGGLKSSAWPRIAEELEKLLGKRYTSKQLKNGWDYMKRQYLI 77

Query: 258 WKYLLNKTGHEYNATTVTFDWPQSVWDDVIR 350
           W  ++  TGH YN+ T TFDWP   W++ ++
Sbjct: 78  WSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQ 108


>emb|CBI26086.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/91 (42%), Positives = 53/91 (58%)
 Frame = +3

Query: 78  KKRLIELCLREVNTCGYQGNSLKSVSWDRIKKEIHKEFGLIFKQKDIKNKWDYLRKSYQA 257
           +K  I+LCL E N+    G +LK  SW RI KE+ K  G  F QK +KN WDY++K Y  
Sbjct: 38  RKHFIDLCLHEANSGFRSGGTLKPSSWPRIIKELEKLVGKRFNQKQLKNAWDYMKKQYLT 97

Query: 258 WKYLLNKTGHEYNATTVTFDWPQSVWDDVIR 350
           W  L+   G  YN+ T TFD P   W++ ++
Sbjct: 98  WSRLITMMGDGYNSVTKTFDLPTERWEEYLQ 128


>emb|CAN75599.1| hypothetical protein VITISV_025756 [Vitis vinifera]
          Length = 251

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 36/91 (39%), Positives = 54/91 (59%)
 Frame = +3

Query: 78  KKRLIELCLREVNTCGYQGNSLKSVSWDRIKKEIHKEFGLIFKQKDIKNKWDYLRKSYQA 257
           +K  I+LCL+E N     G  LKS +W RI +E+ K  G  +  K +KN  DY+++ Y  
Sbjct: 18  RKHFIDLCLQEANKGFRXGGGLKSSAWPRIAEELEKLLGKRYTSKQLKNGXDYMKRQYLI 77

Query: 258 WKYLLNKTGHEYNATTVTFDWPQSVWDDVIR 350
           W  ++  TGH YN+ T TFDWP   W++ ++
Sbjct: 78  WXKMMTMTGHGYNSVTKTFDWPAEKWEEYLQ 108


Top