BLASTX nr result
ID: Coptis21_contig00029834
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00029834 (711 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26017.3| unnamed protein product [Vitis vinifera] 301 1e-79 ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-l... 301 1e-79 ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-l... 297 2e-78 emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera] 291 9e-77 ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-l... 291 1e-76 >emb|CBI26017.3| unnamed protein product [Vitis vinifera] Length = 326 Score = 301 bits (770), Expect = 1e-79 Identities = 145/194 (74%), Positives = 165/194 (85%) Frame = +3 Query: 3 DIRVREISPALPEFHARFSAERKIYHYKIYNDTIMDPFQCRYAYHSLYRLNASAMREAAK 182 DIRVREISPA+PEFHARFS + KIYHYKIYND +MDPF Y YHS+Y+LN AMREAAK Sbjct: 133 DIRVREISPAVPEFHARFSVKSKIYHYKIYNDAVMDPFLRHYVYHSVYKLNTLAMREAAK 192 Query: 183 YFVGEHDFSSFSNASKEGCPRSPVKHICRFDVNELGPILQLEVEGSGFLYRQVRNMVALL 362 +F G+HDFS+F NAS +PVK+I RFDVNE+G +LQLEVEGSGFLYRQVRNMVALL Sbjct: 193 HFTGKHDFSAFVNASHNDRSPNPVKNIFRFDVNEMGALLQLEVEGSGFLYRQVRNMVALL 252 Query: 363 LQIGKEAVPPDIVPMILDSQDRKVLAKYTLSAPPHGLCLMSVKYNEELLEPPSCCPATSF 542 LQIG+EA+PP+IVP IL ++DRK LAKY LSAPPHGLCLMSVKYNEE L+ PS CPATS Sbjct: 253 LQIGREAIPPNIVPWILATRDRKELAKYALSAPPHGLCLMSVKYNEEHLQLPSGCPATSH 312 Query: 543 GRHSSISKCKLPFY 584 GRH ++ KCKLPFY Sbjct: 313 GRHHTVRKCKLPFY 326 >ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Vitis vinifera] Length = 336 Score = 301 bits (770), Expect = 1e-79 Identities = 145/194 (74%), Positives = 165/194 (85%) Frame = +3 Query: 3 DIRVREISPALPEFHARFSAERKIYHYKIYNDTIMDPFQCRYAYHSLYRLNASAMREAAK 182 DIRVREISPA+PEFHARFS + KIYHYKIYND +MDPF Y YHS+Y+LN AMREAAK Sbjct: 143 DIRVREISPAVPEFHARFSVKSKIYHYKIYNDAVMDPFLRHYVYHSVYKLNTLAMREAAK 202 Query: 183 YFVGEHDFSSFSNASKEGCPRSPVKHICRFDVNELGPILQLEVEGSGFLYRQVRNMVALL 362 +F G+HDFS+F NAS +PVK+I RFDVNE+G +LQLEVEGSGFLYRQVRNMVALL Sbjct: 203 HFTGKHDFSAFVNASHNDRSPNPVKNIFRFDVNEMGALLQLEVEGSGFLYRQVRNMVALL 262 Query: 363 LQIGKEAVPPDIVPMILDSQDRKVLAKYTLSAPPHGLCLMSVKYNEELLEPPSCCPATSF 542 LQIG+EA+PP+IVP IL ++DRK LAKY LSAPPHGLCLMSVKYNEE L+ PS CPATS Sbjct: 263 LQIGREAIPPNIVPWILATRDRKELAKYALSAPPHGLCLMSVKYNEEHLQLPSGCPATSH 322 Query: 543 GRHSSISKCKLPFY 584 GRH ++ KCKLPFY Sbjct: 323 GRHHTVRKCKLPFY 336 >ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max] Length = 309 Score = 297 bits (760), Expect = 2e-78 Identities = 143/195 (73%), Positives = 165/195 (84%), Gaps = 1/195 (0%) Frame = +3 Query: 3 DIRVREISPALPEFHARFSAERKIYHYKIYNDTIMDPFQCRYAYHSLYRLNASAMREAAK 182 DIRVREISPA EFHARFSA KIYHYKIYND IMDPFQ +AYHS+Y+LN++ MREAAK Sbjct: 114 DIRVREISPASAEFHARFSAISKIYHYKIYNDAIMDPFQRHFAYHSVYKLNSAVMREAAK 173 Query: 183 YFVGEHDFSSFSNASKEGCPRSPVKHICRFDVNELGPILQLEVEGSGFLYRQVRNMVALL 362 YFVG+HDFS+F+NAS PVKH+ RFD+ E+G +LQ+EVEGSGFLYRQVRNMVALL Sbjct: 174 YFVGKHDFSAFANASNNDGVPDPVKHVFRFDLKEMGALLQIEVEGSGFLYRQVRNMVALL 233 Query: 363 LQIGKEAVPPDIVPMILDSQDRKVLAKYTLSAPPHGLCLMSVKYNE-ELLEPPSCCPATS 539 LQIG+EA+PPDIVP IL S+DRK LAKY+LSAPPHGLCL+S+ YNE LL PP C PA S Sbjct: 234 LQIGREAIPPDIVPHILASRDRKELAKYSLSAPPHGLCLVSINYNESHLLPPPGCPPANS 293 Query: 540 FGRHSSISKCKLPFY 584 FGRH +I KCK+PF+ Sbjct: 294 FGRHHTIRKCKVPFF 308 >emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera] Length = 403 Score = 291 bits (745), Expect = 9e-77 Identities = 145/207 (70%), Positives = 165/207 (79%), Gaps = 13/207 (6%) Frame = +3 Query: 3 DIRVREISPALPEFHARFSAERKIYHYKIYNDTIMDPFQCRYAYHSLYRLNASAMREAAK 182 DIRVREISPA+PEFHARFS + KIYHYKIYND +MDPF Y YHS+Y+LN AMREAAK Sbjct: 197 DIRVREISPAVPEFHARFSXKSKIYHYKIYNDAVMDPFLRHYVYHSVYKLNTLAMREAAK 256 Query: 183 YFVGEHDFSSFSNASKEGCPRSPVKHICRFDVNEL-------------GPILQLEVEGSG 323 +F G+HDFS+F NAS +PVK+I RFDVNE+ G +LQLEVEGSG Sbjct: 257 HFTGKHDFSAFVNASHNDRSPNPVKNIFRFDVNEMMFLELIVNCIIAQGALLQLEVEGSG 316 Query: 324 FLYRQVRNMVALLLQIGKEAVPPDIVPMILDSQDRKVLAKYTLSAPPHGLCLMSVKYNEE 503 FLYRQVRNMVALLLQIG+EA+PP+IVP IL ++DRK LAKY LSAPPHGLCLMSVKYNEE Sbjct: 317 FLYRQVRNMVALLLQIGREAIPPNIVPWILATRDRKELAKYALSAPPHGLCLMSVKYNEE 376 Query: 504 LLEPPSCCPATSFGRHSSISKCKLPFY 584 L+ PS CPATS GRH ++ KCKLPFY Sbjct: 377 HLQLPSGCPATSHGRHHTVRKCKLPFY 403 >ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max] Length = 327 Score = 291 bits (744), Expect = 1e-76 Identities = 140/195 (71%), Positives = 163/195 (83%), Gaps = 1/195 (0%) Frame = +3 Query: 3 DIRVREISPALPEFHARFSAERKIYHYKIYNDTIMDPFQCRYAYHSLYRLNASAMREAAK 182 DIR+REISPA EFHARFSA+ KIYHYKIYND IMDPFQ +AYHS+Y+LN++ MREAA Sbjct: 132 DIRIREISPASAEFHARFSAKSKIYHYKIYNDAIMDPFQRHFAYHSVYKLNSAVMREAAT 191 Query: 183 YFVGEHDFSSFSNASKEGCPRSPVKHICRFDVNELGPILQLEVEGSGFLYRQVRNMVALL 362 YFVG+HDFS+F+NAS PVKH+ RFD+ E+G +LQLEVEGSGFLYRQVRNMVALL Sbjct: 192 YFVGKHDFSAFANASHNDRVPDPVKHVFRFDLKEMGALLQLEVEGSGFLYRQVRNMVALL 251 Query: 363 LQIGKEAVPPDIVPMILDSQDRKVLAKYTLSAPPHGLCLMSVKYNE-ELLEPPSCCPATS 539 LQIG+EA+PPDIVP IL S+DRK LAKY+L APPHGLCL+S+ YNE LL PP PA S Sbjct: 252 LQIGREAIPPDIVPHILASRDRKELAKYSLPAPPHGLCLVSINYNESHLLPPPESPPANS 311 Query: 540 FGRHSSISKCKLPFY 584 FGRH +I KCK+PF+ Sbjct: 312 FGRHQTIRKCKVPFF 326