BLASTX nr result

ID: Coptis21_contig00029830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029830
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531167.1| conserved hypothetical protein [Ricinus comm...   128   4e-28
ref|XP_003553638.1| PREDICTED: uncharacterized protein LOC100801...   115   3e-24
ref|XP_003521517.1| PREDICTED: uncharacterized protein LOC100808...   115   3e-24
emb|CBI29972.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_002281091.1| PREDICTED: uncharacterized protein LOC100255...   115   4e-24

>ref|XP_002531167.1| conserved hypothetical protein [Ricinus communis]
           gi|223529237|gb|EEF31210.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 430

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/83 (72%), Positives = 70/83 (84%)
 Frame = +2

Query: 65  PNQQHSNHSYHLLHQCRGIVKVRLKWVKNRGLDHIIDKETDLKAGVLLKDAIKRTTTGFI 244
           PN   SN+ YH   QCR IVKVRLKWVKNR LDHIID+ETDLKA  LLKDAIKR+ TGF+
Sbjct: 19  PNNIRSNNLYHYFLQCRSIVKVRLKWVKNRSLDHIIDRETDLKAACLLKDAIKRSPTGFL 78

Query: 245 TSQTISDWQKHLGLTIPVLRFLR 313
           T+++++DWQK LGLT+PVLRFLR
Sbjct: 79  TAKSVADWQKLLGLTVPVLRFLR 101


>ref|XP_003553638.1| PREDICTED: uncharacterized protein LOC100801315 [Glycine max]
          Length = 387

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/69 (76%), Positives = 63/69 (91%)
 Frame = +2

Query: 107 QCRGIVKVRLKWVKNRGLDHIIDKETDLKAGVLLKDAIKRTTTGFITSQTISDWQKHLGL 286
           Q RGIVKVRLKWVKNR LDH+IDKETDLKA  LLKDA+ R++TGF+T+Q+++DWQK LGL
Sbjct: 4   QWRGIVKVRLKWVKNRSLDHVIDKETDLKAACLLKDAVNRSSTGFLTAQSVADWQKLLGL 63

Query: 287 TIPVLRFLR 313
           T+PVLRFLR
Sbjct: 64  TVPVLRFLR 72


>ref|XP_003521517.1| PREDICTED: uncharacterized protein LOC100808403 [Glycine max]
          Length = 391

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/69 (76%), Positives = 63/69 (91%)
 Frame = +2

Query: 107 QCRGIVKVRLKWVKNRGLDHIIDKETDLKAGVLLKDAIKRTTTGFITSQTISDWQKHLGL 286
           Q RGIVKVRLKWVKNR LDH+IDKETDLKA  LLKDA+ R++TGF+T+Q+++DWQK LGL
Sbjct: 14  QWRGIVKVRLKWVKNRSLDHVIDKETDLKAACLLKDAVNRSSTGFLTAQSVADWQKLLGL 73

Query: 287 TIPVLRFLR 313
           T+PVLRFLR
Sbjct: 74  TVPVLRFLR 82


>emb|CBI29972.3| unnamed protein product [Vitis vinifera]
          Length = 444

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/98 (60%), Positives = 73/98 (74%)
 Frame = +2

Query: 20  MNLRNAATLFSLFNLPNQQHSNHSYHLLHQCRGIVKVRLKWVKNRGLDHIIDKETDLKAG 199
           MNLR+A        +P   H +H      QCRGIV+VRLKWVKNR LDHIID ETDLKA 
Sbjct: 1   MNLRSAIHYGFSSIIPKFLHHHHL-----QCRGIVRVRLKWVKNRSLDHIIDTETDLKAV 55

Query: 200 VLLKDAIKRTTTGFITSQTISDWQKHLGLTIPVLRFLR 313
            LLKDAIKR+++GF+ S ++++WQK LGLT+PVLRF+R
Sbjct: 56  CLLKDAIKRSSSGFLASNSVANWQKLLGLTVPVLRFMR 93


>ref|XP_002281091.1| PREDICTED: uncharacterized protein LOC100255516 [Vitis vinifera]
          Length = 425

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/98 (60%), Positives = 73/98 (74%)
 Frame = +2

Query: 20  MNLRNAATLFSLFNLPNQQHSNHSYHLLHQCRGIVKVRLKWVKNRGLDHIIDKETDLKAG 199
           MNLR+A        +P   H +H      QCRGIV+VRLKWVKNR LDHIID ETDLKA 
Sbjct: 1   MNLRSAIHYGFSSIIPKFLHHHHL-----QCRGIVRVRLKWVKNRSLDHIIDTETDLKAV 55

Query: 200 VLLKDAIKRTTTGFITSQTISDWQKHLGLTIPVLRFLR 313
            LLKDAIKR+++GF+ S ++++WQK LGLT+PVLRF+R
Sbjct: 56  CLLKDAIKRSSSGFLASNSVANWQKLLGLTVPVLRFMR 93


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