BLASTX nr result

ID: Coptis21_contig00029825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029825
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146041.1| PREDICTED: uncharacterized exonuclease domai...   160   1e-37
ref|XP_003628533.1| Exonuclease domain-containing protein, putat...   159   3e-37
ref|XP_002282697.1| PREDICTED: uncharacterized exonuclease domai...   158   5e-37
emb|CBI20250.3| unnamed protein product [Vitis vinifera]              156   2e-36
ref|XP_003573813.1| PREDICTED: uncharacterized exonuclease domai...   154   9e-36

>ref|XP_004146041.1| PREDICTED: uncharacterized exonuclease domain-containing protein
           At3g15140-like [Cucumis sativus]
           gi|449510343|ref|XP_004163638.1| PREDICTED:
           uncharacterized exonuclease domain-containing protein
           At3g15140-like [Cucumis sativus]
          Length = 325

 Score =  160 bits (405), Expect = 1e-37
 Identities = 70/114 (61%), Positives = 93/114 (81%)
 Frame = -1

Query: 345 EVHGMTTGRFKHTCLYYTQGKCTMMDDPIHLEKFNHDLSAGLQVDADKLEKLKSQNFDYF 166
           E   +   R++ TCLY+T G+CTMMDDP+H++KFNHD+S  LQVD  +   +++Q+FDYF
Sbjct: 59  EFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYF 118

Query: 165 LVLDLEGKVEILEFPVVMVDAKTLCAVDIFHRFVKPDRMAEQKMNEYIEGKYGK 4
           LVLDLEGKVEI+EFPV++V+AKT+     FHRFV+P RM+EQ++NEYIEGKYGK
Sbjct: 119 LVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGK 172


>ref|XP_003628533.1| Exonuclease domain-containing protein, putative [Medicago
           truncatula] gi|355522555|gb|AET03009.1| Exonuclease
           domain-containing protein, putative [Medicago
           truncatula]
          Length = 308

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/111 (67%), Positives = 90/111 (81%)
 Frame = -1

Query: 333 MTTGRFKHTCLYYTQGKCTMMDDPIHLEKFNHDLSAGLQVDADKLEKLKSQNFDYFLVLD 154
           ++T R K  CLY+TQGKCTMMDD +HL+KFNHD S  LQV+   L K+ SQN D+FLVLD
Sbjct: 49  LSTSRSKPMCLYHTQGKCTMMDDLVHLDKFNHDCSKELQVNIAGLSKVHSQNHDFFLVLD 108

Query: 153 LEGKVEILEFPVVMVDAKTLCAVDIFHRFVKPDRMAEQKMNEYIEGKYGKM 1
           LEGKVEILEFPV+ + AKTL   DIFHRFV+P  M+EQ++NEYIEGKYGK+
Sbjct: 109 LEGKVEILEFPVLKISAKTLKVEDIFHRFVRPSNMSEQRINEYIEGKYGKI 159


>ref|XP_002282697.1| PREDICTED: uncharacterized exonuclease domain-containing protein
           At3g15140 [Vitis vinifera]
          Length = 319

 Score =  158 bits (399), Expect = 5e-37
 Identities = 71/107 (66%), Positives = 90/107 (84%)
 Frame = -1

Query: 321 RFKHTCLYYTQGKCTMMDDPIHLEKFNHDLSAGLQVDADKLEKLKSQNFDYFLVLDLEGK 142
           R++  CLYYTQGKCT MDDP HLE FNH+ S  LQV+A   + L+SQ+ D+FLVLDLEGK
Sbjct: 60  RWRPMCLYYTQGKCTKMDDPTHLETFNHNCSRELQVNAANFQHLQSQHLDFFLVLDLEGK 119

Query: 141 VEILEFPVVMVDAKTLCAVDIFHRFVKPDRMAEQKMNEYIEGKYGKM 1
           +EILEFPV+M++AKT+  VD+FHRFV+P  M+EQ++NEYIEGKYGK+
Sbjct: 120 IEILEFPVLMINAKTMDVVDLFHRFVRPSEMSEQRINEYIEGKYGKL 166


>emb|CBI20250.3| unnamed protein product [Vitis vinifera]
          Length = 256

 Score =  156 bits (394), Expect = 2e-36
 Identities = 70/102 (68%), Positives = 87/102 (85%)
 Frame = -1

Query: 306 CLYYTQGKCTMMDDPIHLEKFNHDLSAGLQVDADKLEKLKSQNFDYFLVLDLEGKVEILE 127
           CLYYTQGKCT MDDP HLE FNH+ S  LQV+A   + L+SQ+ D+FLVLDLEGK+EILE
Sbjct: 2   CLYYTQGKCTKMDDPTHLETFNHNCSRELQVNAANFQHLQSQHLDFFLVLDLEGKIEILE 61

Query: 126 FPVVMVDAKTLCAVDIFHRFVKPDRMAEQKMNEYIEGKYGKM 1
           FPV+M++AKT+  VD+FHRFV+P  M+EQ++NEYIEGKYGK+
Sbjct: 62  FPVLMINAKTMDVVDLFHRFVRPSEMSEQRINEYIEGKYGKL 103


>ref|XP_003573813.1| PREDICTED: uncharacterized exonuclease domain-containing protein
           At3g15140-like [Brachypodium distachyon]
          Length = 337

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/129 (57%), Positives = 92/129 (71%)
 Frame = -1

Query: 390 DDAAHLEKFSHDILDEVHGMTTGRFKHTCLYYTQGKCTMMDDPIHLEKFNHDLSAGLQVD 211
           D  A   +   D+++     +   +K  CLYYTQGKCTMMDD  HLEKFNH+L   L V+
Sbjct: 56  DSFASTAREEGDVIEAPRSTSRRPWKPMCLYYTQGKCTMMDDTFHLEKFNHNLMMDLPVN 115

Query: 210 ADKLEKLKSQNFDYFLVLDLEGKVEILEFPVVMVDAKTLCAVDIFHRFVKPDRMAEQKMN 31
           A   +K+K Q  DYFLVLDLEGKVEILEFPVVM+DA ++  VD FHRFV+P  M+EQ++ 
Sbjct: 116 ASAADKVKPQKLDYFLVLDLEGKVEILEFPVVMIDAHSMEFVDSFHRFVRPTAMSEQRIR 175

Query: 30  EYIEGKYGK 4
           EYI+GKYGK
Sbjct: 176 EYIDGKYGK 184


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