BLASTX nr result

ID: Coptis21_contig00029819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029819
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG75111.1| transcription factor MYB811 [Fagus crenata]            61   8e-08
ref|XP_002529906.1| conserved hypothetical protein [Ricinus comm...    58   9e-07

>dbj|BAG75111.1| transcription factor MYB811 [Fagus crenata]
          Length = 566

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
 Frame = -3

Query: 389 AGVEIKKESTVEINNSVEDDDLSSLLNILPSSMMVSDLYNEGAETSNGQSS-VTDDGIGL 213
           AG++ K+ES V++NN  ED  LS LLN+  +  + +D Y++  E SNGQSS VTD+ IG+
Sbjct: 476 AGLKPKEESGVQMNNMQED--LSKLLNV--NMQIPTDWYSDSGEVSNGQSSGVTDENIGI 531

Query: 212 GRQHVPXXXXXXXXXTMDQDWTIG--AWNNLPEMC 114
             QH+            +   T G  +W+NLP +C
Sbjct: 532 DMQHIASLFPLAATTDHNHSRTTGSCSWDNLPGIC 566


>ref|XP_002529906.1| conserved hypothetical protein [Ricinus communis]
           gi|223530583|gb|EEF32460.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 244

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
 Frame = -3

Query: 425 SQWDEASSAQSSAGVEIKKESTVEINNSVEDDDLSSLLNILPSSMMVSDLYNEGAETSNG 246
           + W++ +S    +G + K E   ++N   ED  LS +LN LPS+M   +LY++ A+ SNG
Sbjct: 146 THWNQLNSLDMCSGFDPKFEVADQLNEMPED--LSKILNNLPSTMQ-PELYSDSADISNG 202

Query: 245 QSS-VTDDGIGLGRQHVPXXXXXXXXXTMDQDWTIG--AWNNLPEMC 114
            SS VTDD IG   Q +            D   T+G  +W+NLP +C
Sbjct: 203 PSSVVTDDNIGFEMQQI-----ASLFPPADHGRTLGSCSWDNLPGIC 244


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