BLASTX nr result
ID: Coptis21_contig00029785
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00029785 (302 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 112 1e-24 gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 107 2e-23 dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 106 7e-23 emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 105 2e-22 emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] 103 3e-22 >gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] Length = 1556 Score = 112 bits (279), Expect(2) = 1e-24 Identities = 47/77 (61%), Positives = 62/77 (80%) Frame = +3 Query: 3 LNRCTHCLVGKQHRVSFQRFPSHRKDNVLELVHTDLCGPMKVKSHEGALYFLTFIDDASR 182 L +C+HC+ GKQ RVSF++ P +K +LELVH+D+CGP+KVKS G +YF+TFIDD SR Sbjct: 446 LEKCSHCMAGKQTRVSFKKHPPSKKSELLELVHSDVCGPLKVKSFTGTIYFVTFIDDCSR 505 Query: 183 KIWAYSLKTKDEVLGVF 233 K+W Y+LKTKD+VL F Sbjct: 506 KLWVYALKTKDQVLAKF 522 Score = 25.8 bits (55), Expect(2) = 1e-24 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +1 Query: 271 CIRSDNGGEY 300 CIR+DNGGEY Sbjct: 539 CIRTDNGGEY 548 >gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] Length = 1415 Score = 107 bits (268), Expect(2) = 2e-23 Identities = 48/77 (62%), Positives = 59/77 (76%) Frame = +3 Query: 3 LNRCTHCLVGKQHRVSFQRFPSHRKDNVLELVHTDLCGPMKVKSHEGALYFLTFIDDASR 182 L++C HCL GKQ RVSF P RK L+L+H+D+CGPMKV+S GA YF+TFIDD SR Sbjct: 449 LDKCVHCLAGKQRRVSFMSHPPTRKSEPLDLIHSDVCGPMKVRSLGGASYFVTFIDDYSR 508 Query: 183 KIWAYSLKTKDEVLGVF 233 K+W Y+LK K +VLGVF Sbjct: 509 KLWVYTLKHKSDVLGVF 525 Score = 25.8 bits (55), Expect(2) = 2e-23 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +1 Query: 271 CIRSDNGGEY 300 CIR+DNGGEY Sbjct: 542 CIRTDNGGEY 551 >dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] Length = 1338 Score = 106 bits (264), Expect(2) = 7e-23 Identities = 50/77 (64%), Positives = 60/77 (77%) Frame = +3 Query: 3 LNRCTHCLVGKQHRVSFQRFPSHRKDNVLELVHTDLCGPMKVKSHEGALYFLTFIDDASR 182 L +C CL GKQ+RVSF+RFP R+ NVL+LVH+D+CGP K KS GA YF+TFIDD SR Sbjct: 452 LKKCADCLAGKQNRVSFKRFPPSRRQNVLDLVHSDVCGPFK-KSLGGARYFVTFIDDHSR 510 Query: 183 KIWAYSLKTKDEVLGVF 233 K W Y+LKTKD+V VF Sbjct: 511 KTWVYTLKTKDQVFQVF 527 Score = 25.8 bits (55), Expect(2) = 7e-23 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +1 Query: 271 CIRSDNGGEY 300 CIR+DNGGEY Sbjct: 544 CIRTDNGGEY 553 >emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] Length = 1207 Score = 105 bits (261), Expect(2) = 2e-22 Identities = 48/77 (62%), Positives = 60/77 (77%) Frame = +3 Query: 3 LNRCTHCLVGKQHRVSFQRFPSHRKDNVLELVHTDLCGPMKVKSHEGALYFLTFIDDASR 182 L RC HCL GKQ RV+F+ RK +L+LV++D+CGPMK K+ G+LYF+TFIDD SR Sbjct: 334 LKRCAHCLAGKQTRVAFKTLRYTRKPGMLDLVYSDVCGPMKTKTLGGSLYFVTFIDDHSR 393 Query: 183 KIWAYSLKTKDEVLGVF 233 KIW Y+LKTKD+VL VF Sbjct: 394 KIWVYTLKTKDQVLDVF 410 Score = 25.8 bits (55), Expect(2) = 2e-22 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +1 Query: 271 CIRSDNGGEY 300 CIR+DNGGEY Sbjct: 427 CIRTDNGGEY 436 >emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] Length = 1317 Score = 103 bits (258), Expect(2) = 3e-22 Identities = 47/77 (61%), Positives = 59/77 (76%) Frame = +3 Query: 3 LNRCTHCLVGKQHRVSFQRFPSHRKDNVLELVHTDLCGPMKVKSHEGALYFLTFIDDASR 182 L RC HCL GKQ RV+F+ RK + +LV++D+CGPMK K+ G+LYF+TFIDD SR Sbjct: 402 LKRCAHCLAGKQTRVAFKTLRHTRKPGMFDLVYSDVCGPMKTKTLGGSLYFVTFIDDHSR 461 Query: 183 KIWAYSLKTKDEVLGVF 233 KIW Y+LKTKD+VL VF Sbjct: 462 KIWVYTLKTKDQVLDVF 478 Score = 25.8 bits (55), Expect(2) = 3e-22 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +1 Query: 271 CIRSDNGGEY 300 CIR+DNGGEY Sbjct: 495 CIRTDNGGEY 504