BLASTX nr result

ID: Coptis21_contig00029783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029783
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19537.3| unnamed protein product [Vitis vinifera]              175   6e-42
ref|XP_002282636.1| PREDICTED: origin recognition complex subuni...   175   6e-42
ref|XP_004152733.1| PREDICTED: origin recognition complex subuni...   173   2e-41
ref|NP_973624.1| origin recognition complex subunit 2 [Arabidops...   171   1e-40
ref|NP_181292.1| origin recognition complex subunit 2 [Arabidops...   171   1e-40

>emb|CBI19537.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  175 bits (444), Expect = 6e-42
 Identities = 86/117 (73%), Positives = 96/117 (82%)
 Frame = +1

Query: 304 MDVNEADEEEFGFSRNYFLAKELRGSSKKSTGKLSQLNLVDEQELREAGSKIVIKHEKEI 483
           M+ N  ++EEFGF+RNYF+AKEL GS KKS+ KLS + LVDEQELR A   I  KHEKEI
Sbjct: 1   MEGNYGEDEEFGFARNYFIAKELGGSGKKSSRKLSDIELVDEQELRAAARSIESKHEKEI 60

Query: 484 GDLVNGYKNFYSKWVFELRCGFGLLMYGFGSKKTLIEDFASTALTEYGVIVINGYLQ 654
           G L+N YK+ Y KWVFELRCGFGLLMYGFGSKK LIEDFASTALTE  V+VINGYLQ
Sbjct: 61  GSLLNSYKSLYPKWVFELRCGFGLLMYGFGSKKALIEDFASTALTECAVLVINGYLQ 117


>ref|XP_002282636.1| PREDICTED: origin recognition complex subunit 2-like [Vitis
           vinifera]
          Length = 362

 Score =  175 bits (444), Expect = 6e-42
 Identities = 86/117 (73%), Positives = 96/117 (82%)
 Frame = +1

Query: 304 MDVNEADEEEFGFSRNYFLAKELRGSSKKSTGKLSQLNLVDEQELREAGSKIVIKHEKEI 483
           M+ N  ++EEFGF+RNYF+AKEL GS KKS+ KLS + LVDEQELR A   I  KHEKEI
Sbjct: 1   MEGNYGEDEEFGFARNYFIAKELGGSGKKSSRKLSDIELVDEQELRAAARSIESKHEKEI 60

Query: 484 GDLVNGYKNFYSKWVFELRCGFGLLMYGFGSKKTLIEDFASTALTEYGVIVINGYLQ 654
           G L+N YK+ Y KWVFELRCGFGLLMYGFGSKK LIEDFASTALTE  V+VINGYLQ
Sbjct: 61  GSLLNSYKSLYPKWVFELRCGFGLLMYGFGSKKALIEDFASTALTECAVLVINGYLQ 117


>ref|XP_004152733.1| PREDICTED: origin recognition complex subunit 2-like [Cucumis
           sativus] gi|449496004|ref|XP_004160009.1| PREDICTED:
           origin recognition complex subunit 2-like [Cucumis
           sativus]
          Length = 360

 Score =  173 bits (439), Expect = 2e-41
 Identities = 82/117 (70%), Positives = 100/117 (85%)
 Frame = +1

Query: 304 MDVNEADEEEFGFSRNYFLAKELRGSSKKSTGKLSQLNLVDEQELREAGSKIVIKHEKEI 483
           M+V++ D+EEF FSRNYFLAKEL GS KKS+GKL+ +++VDEQELR A +    KHE+EI
Sbjct: 1   MEVDDLDDEEFAFSRNYFLAKELGGSKKKSSGKLADIDVVDEQELRAAAANTEPKHEREI 60

Query: 484 GDLVNGYKNFYSKWVFELRCGFGLLMYGFGSKKTLIEDFASTALTEYGVIVINGYLQ 654
             L++ YK+ Y+KWVFELRCGFGLLMYGFGSKK+LIEDFASTAL +Y VIV+NGYLQ
Sbjct: 61  AALISSYKSSYAKWVFELRCGFGLLMYGFGSKKSLIEDFASTALMDYSVIVVNGYLQ 117


>ref|NP_973624.1| origin recognition complex subunit 2 [Arabidopsis thaliana]
           gi|330254323|gb|AEC09417.1| origin recognition complex
           subunit 2 [Arabidopsis thaliana]
          Length = 345

 Score =  171 bits (433), Expect = 1e-40
 Identities = 79/115 (68%), Positives = 96/115 (83%)
 Frame = +1

Query: 307 DVNEADEEEFGFSRNYFLAKELRGSSKKSTGKLSQLNLVDEQELREAGSKIVIKHEKEIG 486
           D+   +E+E+GFSRNYFLAKEL G+SK+S  KLS +++VDEQELRE  S I +KH KEI 
Sbjct: 3   DIENIEEDEYGFSRNYFLAKELGGASKRSAHKLSDIHIVDEQELRETASTIEMKHSKEIS 62

Query: 487 DLVNGYKNFYSKWVFELRCGFGLLMYGFGSKKTLIEDFASTALTEYGVIVINGYL 651
           +L++ YK  YSKWVFELRCGFGLLMYGFGSKK L+EDFAS +LT+Y V+VINGYL
Sbjct: 63  ELMSDYKTMYSKWVFELRCGFGLLMYGFGSKKALVEDFASASLTDYSVVVINGYL 117


>ref|NP_181292.1| origin recognition complex subunit 2 [Arabidopsis thaliana]
           gi|2498706|sp|Q38899.1|ORC2_ARATH RecName: Full=Origin
           recognition complex subunit 2 gi|1113103|gb|AAC49131.1|
           atOrc2p [Arabidopsis thaliana] gi|3236239|gb|AAC23627.1|
           origin recognition complex protein [Arabidopsis
           thaliana] gi|17979313|gb|AAL49882.1| putative origin
           recognition complex protein [Arabidopsis thaliana]
           gi|20465531|gb|AAM20248.1| putative origin recognition
           complex [Arabidopsis thaliana]
           gi|21593764|gb|AAM65731.1| origin recognition complex
           protein [Arabidopsis thaliana]
           gi|330254322|gb|AEC09416.1| origin recognition complex
           subunit 2 [Arabidopsis thaliana]
          Length = 363

 Score =  171 bits (433), Expect = 1e-40
 Identities = 79/115 (68%), Positives = 96/115 (83%)
 Frame = +1

Query: 307 DVNEADEEEFGFSRNYFLAKELRGSSKKSTGKLSQLNLVDEQELREAGSKIVIKHEKEIG 486
           D+   +E+E+GFSRNYFLAKEL G+SK+S  KLS +++VDEQELRE  S I +KH KEI 
Sbjct: 3   DIENIEEDEYGFSRNYFLAKELGGASKRSAHKLSDIHIVDEQELRETASTIEMKHSKEIS 62

Query: 487 DLVNGYKNFYSKWVFELRCGFGLLMYGFGSKKTLIEDFASTALTEYGVIVINGYL 651
           +L++ YK  YSKWVFELRCGFGLLMYGFGSKK L+EDFAS +LT+Y V+VINGYL
Sbjct: 63  ELMSDYKTMYSKWVFELRCGFGLLMYGFGSKKALVEDFASASLTDYSVVVINGYL 117


Top