BLASTX nr result

ID: Coptis21_contig00029778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029778
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301665.1| predicted protein [Populus trichocarpa] gi|2...   233   9e-60
ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glyc...   229   2e-58
ref|XP_003544361.1| PREDICTED: potassium channel SKOR-like [Glyc...   228   3e-58
emb|CAN64951.1| hypothetical protein VITISV_022830 [Vitis vinifera]   228   4e-58
ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|2...   226   2e-57

>ref|XP_002301665.1| predicted protein [Populus trichocarpa] gi|222843391|gb|EEE80938.1|
            predicted protein [Populus trichocarpa]
          Length = 841

 Score =  233 bits (595), Expect = 9e-60
 Identities = 113/141 (80%), Positives = 123/141 (87%)
 Frame = -3

Query: 425  PLHFAASKGYEDITLFLIQEGVDVNISDNFGNTPLFEAIKNGHDRVVSLLVKEGASLKID 246
            PLH AAS+GYEDITLFLIQEGVD+NI D FGNTPL EAIKNGHDRV SLL K+GA L ID
Sbjct: 593  PLHLAASRGYEDITLFLIQEGVDINIKDKFGNTPLLEAIKNGHDRVESLLFKQGAILNID 652

Query: 245  DAGSFLCAAVARGDLDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMTKLLIEAGAS 66
            DAGS LC AVARGD D+LKR+LSNGIDP+S DY HRTPLHVA+++GLYLM KLLIEAGAS
Sbjct: 653  DAGSVLCRAVARGDSDFLKRILSNGIDPNSKDYDHRTPLHVAASEGLYLMAKLLIEAGAS 712

Query: 65   VLLKDRWGHTPLDEGRKSGNK 3
            V  KDRWG+TPLDEGR  GNK
Sbjct: 713  VFSKDRWGNTPLDEGRMCGNK 733



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/73 (41%), Positives = 46/73 (63%)
 Frame = -3

Query: 224 AAVARGDLDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMTKLLIEAGASVLLKDRW 45
           +A   GDL  LK  +  G DP+  DY  R+PLH+A++ G   +T  LI+ G  + +KD++
Sbjct: 563 SAAYHGDLYQLKGFIRAGADPNRTDYDGRSPLHLAASRGYEDITLFLIQEGVDINIKDKF 622

Query: 44  GHTPLDEGRKSGN 6
           G+TPL E  K+G+
Sbjct: 623 GNTPLLEAIKNGH 635


>ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glycine max]
          Length = 849

 Score =  229 bits (583), Expect = 2e-58
 Identities = 109/141 (77%), Positives = 124/141 (87%)
 Frame = -3

Query: 425  PLHFAASKGYEDITLFLIQEGVDVNISDNFGNTPLFEAIKNGHDRVVSLLVKEGASLKID 246
            PLH AAS+GYEDIT+FLIQE VDVNI DNFGNTPL EA+KNGHDRV SLLVKEGAS+KI+
Sbjct: 606  PLHLAASRGYEDITIFLIQERVDVNIIDNFGNTPLLEAVKNGHDRVASLLVKEGASMKIE 665

Query: 245  DAGSFLCAAVARGDLDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMTKLLIEAGAS 66
            +AGSFLC AVARGD DYLKRLLSNG+DP+  DY +R+PLHVA+A+GLY M KLL+EAGAS
Sbjct: 666  NAGSFLCTAVARGDSDYLKRLLSNGMDPNLKDYDYRSPLHVAAAEGLYFMAKLLLEAGAS 725

Query: 65   VLLKDRWGHTPLDEGRKSGNK 3
            V  +DRWG+TPLDE R  GNK
Sbjct: 726  VFTRDRWGNTPLDEARMCGNK 746



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/73 (39%), Positives = 44/73 (60%)
 Frame = -3

Query: 224 AAVARGDLDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMTKLLIEAGASVLLKDRW 45
           +A   GD+  LK L+  G DP+  DY  R+PLH+A++ G   +T  LI+    V + D +
Sbjct: 576 SAAFNGDMYQLKGLIRAGADPNKADYDGRSPLHLAASRGYEDITIFLIQERVDVNIIDNF 635

Query: 44  GHTPLDEGRKSGN 6
           G+TPL E  K+G+
Sbjct: 636 GNTPLLEAVKNGH 648


>ref|XP_003544361.1| PREDICTED: potassium channel SKOR-like [Glycine max]
          Length = 850

 Score =  228 bits (582), Expect = 3e-58
 Identities = 108/141 (76%), Positives = 123/141 (87%)
 Frame = -3

Query: 425  PLHFAASKGYEDITLFLIQEGVDVNISDNFGNTPLFEAIKNGHDRVVSLLVKEGASLKID 246
            PLH AAS+GYEDITLFLIQE VDVNI DNFGNTPL EA+KNGHDRV SLLV+EGAS+KI+
Sbjct: 607  PLHLAASRGYEDITLFLIQERVDVNIKDNFGNTPLLEAVKNGHDRVASLLVREGASMKIE 666

Query: 245  DAGSFLCAAVARGDLDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMTKLLIEAGAS 66
            +AGSFLC AVARGD DYLKRLLSNG+DP+  DY +R+PLH+A+A+GLY M KLL+E GAS
Sbjct: 667  NAGSFLCTAVARGDSDYLKRLLSNGMDPNLKDYDYRSPLHIAAAEGLYFMAKLLLEGGAS 726

Query: 65   VLLKDRWGHTPLDEGRKSGNK 3
            V  KDRWG+TPLDE R  GNK
Sbjct: 727  VFTKDRWGNTPLDEARMCGNK 747



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/72 (43%), Positives = 44/72 (61%)
 Frame = -3

Query: 221 AVARGDLDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMTKLLIEAGASVLLKDRWG 42
           A   GDL  LK L+  G DP+  DY  R+PLH+A++ G   +T  LI+    V +KD +G
Sbjct: 578 AAFNGDLYQLKGLIRAGADPNKTDYDGRSPLHLAASRGYEDITLFLIQERVDVNIKDNFG 637

Query: 41  HTPLDEGRKSGN 6
           +TPL E  K+G+
Sbjct: 638 NTPLLEAVKNGH 649


>emb|CAN64951.1| hypothetical protein VITISV_022830 [Vitis vinifera]
          Length = 559

 Score =  228 bits (581), Expect = 4e-58
 Identities = 108/141 (76%), Positives = 122/141 (86%)
 Frame = -3

Query: 425 PLHFAASKGYEDITLFLIQEGVDVNISDNFGNTPLFEAIKNGHDRVVSLLVKEGASLKID 246
           PLH A+++G+EDI  FLIQEGVDVNISDNFGNTPL EAIKN HDRV SLLV +GA LKID
Sbjct: 312 PLHLASARGFEDIVTFLIQEGVDVNISDNFGNTPLLEAIKNAHDRVASLLVNKGALLKID 371

Query: 245 DAGSFLCAAVARGDLDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMTKLLIEAGAS 66
           DAG FLCA +ARGD D+LKR+LSNGIDP+S DY HRTPLHVA+++GLY M KLL+EAGAS
Sbjct: 372 DAGGFLCATIARGDSDFLKRILSNGIDPNSKDYDHRTPLHVAASEGLYFMAKLLLEAGAS 431

Query: 65  VLLKDRWGHTPLDEGRKSGNK 3
           V  KDRWG+TPLDEG K GNK
Sbjct: 432 VFSKDRWGNTPLDEGWKCGNK 452



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/73 (42%), Positives = 43/73 (58%)
 Frame = -3

Query: 224 AAVARGDLDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMTKLLIEAGASVLLKDRW 45
           +A   GDL  LK L+  G DP+  DY  R+PLH+ASA G   +   LI+ G  V + D +
Sbjct: 282 SASYHGDLYQLKSLIRAGADPNKTDYDGRSPLHLASARGFEDIVTFLIQEGVDVNISDNF 341

Query: 44  GHTPLDEGRKSGN 6
           G+TPL E  K+ +
Sbjct: 342 GNTPLLEAIKNAH 354


>ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|222848858|gb|EEE86405.1|
            predicted protein [Populus trichocarpa]
          Length = 821

 Score =  226 bits (575), Expect = 2e-57
 Identities = 110/141 (78%), Positives = 121/141 (85%)
 Frame = -3

Query: 425  PLHFAASKGYEDITLFLIQEGVDVNISDNFGNTPLFEAIKNGHDRVVSLLVKEGASLKID 246
            PLH AAS+GYED TLFLIQEGVD+NI D FGNTPL EAIKNGHDRV SLL ++GA L ID
Sbjct: 581  PLHLAASRGYEDTTLFLIQEGVDINIKDKFGNTPLLEAIKNGHDRVASLLSEQGAILNID 640

Query: 245  DAGSFLCAAVARGDLDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMTKLLIEAGAS 66
            DAGS LC AVARGD D+LKR+LSNGIDP+S DY HRTPLHVA+++GLYLM KLLIEAGAS
Sbjct: 641  DAGSVLCRAVARGDSDFLKRVLSNGIDPNSKDYDHRTPLHVAASEGLYLMAKLLIEAGAS 700

Query: 65   VLLKDRWGHTPLDEGRKSGNK 3
            V  KDRWG+TPL EGR  GNK
Sbjct: 701  VFSKDRWGNTPLVEGRICGNK 721



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/68 (44%), Positives = 44/68 (64%)
 Frame = -3

Query: 209 GDLDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMTKLLIEAGASVLLKDRWGHTPL 30
           GDL  LK L+  G DP+  DY  R+PLH+A++ G    T  LI+ G  + +KD++G+TPL
Sbjct: 556 GDLYQLKGLIRAGADPNRTDYDGRSPLHLAASRGYEDTTLFLIQEGVDINIKDKFGNTPL 615

Query: 29  DEGRKSGN 6
            E  K+G+
Sbjct: 616 LEAIKNGH 623


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