BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029776
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519054.1| pentatricopeptide repeat-containing protein,...    91   8e-17
ref|XP_002527601.1| pentatricopeptide repeat-containing protein,...    85   5e-15
ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containi...    84   1e-14
emb|CBI20322.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containi...    84   1e-14

>ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541717|gb|EEF43265.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 485

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 44/76 (57%), Positives = 53/76 (69%)
 Frame = -1

Query: 230 SRISPLGNPRINLVPVLDKWVQEGNKVRYTEXXXXXXXXXXXXRYTHALQISEWMGTTGV 51
           S+ISPLG+P  +LVP LD WVQ+GNKVR  E            R+T AL++SEWM   G+
Sbjct: 18  SKISPLGDPNTSLVPELDNWVQDGNKVRVGELQRIIRDLRKRNRFTQALEVSEWMNKKGI 77

Query: 50  CTFSSSEHAVQLDLIG 3
           C FSS+EHAVQLDLIG
Sbjct: 78  CIFSSTEHAVQLDLIG 93


>ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533018|gb|EEF34782.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 502

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/76 (57%), Positives = 50/76 (65%)
 Frame = -1

Query: 230 SRISPLGNPRINLVPVLDKWVQEGNKVRYTEXXXXXXXXXXXXRYTHALQISEWMGTTGV 51
           +RISPLG P I+LVPVLD WVQEG K+R  E            RYT ALQ+SEWM   G 
Sbjct: 39  ARISPLGEPDISLVPVLDNWVQEGKKIRGFELQKIIRDLRCHRRYTQALQVSEWMNGKGQ 98

Query: 50  CTFSSSEHAVQLDLIG 3
             FS ++HAVQLDLIG
Sbjct: 99  SGFSPADHAVQLDLIG 114


>ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Glycine max]
          Length = 486

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/76 (55%), Positives = 51/76 (67%)
 Frame = -1

Query: 230 SRISPLGNPRINLVPVLDKWVQEGNKVRYTEXXXXXXXXXXXXRYTHALQISEWMGTTGV 51
           S+ISPLGNP  ++VPVLD WV +GNK+R  E            R++ ALQISEWM   GV
Sbjct: 25  SKISPLGNPNTSVVPVLDDWVFKGNKLRVAELQRIIRDLRKRSRFSQALQISEWMHNKGV 84

Query: 50  CTFSSSEHAVQLDLIG 3
           C FS +E+AV LDLIG
Sbjct: 85  CIFSPTEYAVHLDLIG 100


>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/76 (55%), Positives = 50/76 (65%)
 Frame = -1

Query: 230 SRISPLGNPRINLVPVLDKWVQEGNKVRYTEXXXXXXXXXXXXRYTHALQISEWMGTTGV 51
           SRISPLG P ++LVPVLD+WV+EG KVR  E            RY  AL++SEWM +  +
Sbjct: 41  SRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSKEL 100

Query: 50  CTFSSSEHAVQLDLIG 3
           C FS S  AVQLDLIG
Sbjct: 101 CPFSPSARAVQLDLIG 116


>ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial [Vitis vinifera]
          Length = 504

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/76 (55%), Positives = 50/76 (65%)
 Frame = -1

Query: 230 SRISPLGNPRINLVPVLDKWVQEGNKVRYTEXXXXXXXXXXXXRYTHALQISEWMGTTGV 51
           SRISPLG P ++LVPVLD+WV+EG KVR  E            RY  AL++SEWM +  +
Sbjct: 41  SRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSKEL 100

Query: 50  CTFSSSEHAVQLDLIG 3
           C FS S  AVQLDLIG
Sbjct: 101 CPFSPSARAVQLDLIG 116