BLASTX nr result
ID: Coptis21_contig00029773
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00029773
(240 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002309701.1| predicted protein [Populus trichocarpa] gi|2... 89 5e-16
ref|XP_002309562.1| predicted protein [Populus trichocarpa] gi|2... 87 1e-15
ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat... 85 5e-15
ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat... 84 1e-14
emb|CBI21970.3| unnamed protein product [Vitis vinifera] 84 1e-14
>ref|XP_002309701.1| predicted protein [Populus trichocarpa] gi|222855677|gb|EEE93224.1|
predicted protein [Populus trichocarpa]
Length = 597
Score = 88.6 bits (218), Expect = 5e-16
Identities = 37/78 (47%), Positives = 56/78 (71%)
Frame = -1
Query: 237 CKDYKVREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPDS 58
CK ++ E M+LF M+H+G+TP+++ YNTL+ GFC G+ +E +LF M NG LPD
Sbjct: 384 CKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDL 443
Query: 57 FTFNALIEAFCKEGMVGK 4
FT++ L++ FCK+G +GK
Sbjct: 444 FTYSILLDGFCKQGYLGK 461
Score = 76.6 bits (187), Expect = 2e-12
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = -1
Query: 240 LCKDYKVREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPD 61
LC+D V E +++F M +GI+PD Y +L+ G C +WKE L +EM+ I+PD
Sbjct: 243 LCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPD 302
Query: 60 SFTFNALIEAFCKEGMVGK 4
TFN L++ FCKEG V +
Sbjct: 303 IVTFNVLVDTFCKEGKVSE 321
Score = 55.8 bits (133), Expect = 3e-06
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = -1
Query: 240 LCKDYKVREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPD 61
LCK + + +ELF MV +G PD YNT++ G C G+ L +M G P+
Sbjct: 173 LCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPN 232
Query: 60 SFTFNALIEAFCKEGMVGK 4
T++ LI++ C++ +V +
Sbjct: 233 MVTYSTLIDSLCRDRLVNE 251
Score = 55.5 bits (132), Expect = 5e-06
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = -1
Query: 237 CKDYKVREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPDS 58
C+ +V G + ++ G+ P + + TL+ G C G++ + + LFD+M G PD
Sbjct: 139 CQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDV 198
Query: 57 FTFNALIEAFCKEG 16
+T+N +I CK G
Sbjct: 199 YTYNTIINGLCKIG 212
Score = 54.7 bits (130), Expect = 8e-06
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = -1
Query: 222 VREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPDSFTFNA 43
V E +LF M+ +G P+ YN L+ G+C + + E + LF+EM G+ P++ ++N
Sbjct: 354 VVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNT 413
Query: 42 LIEAFCKEG 16
LI FC+ G
Sbjct: 414 LIHGFCQLG 422
>ref|XP_002309562.1| predicted protein [Populus trichocarpa] gi|222855538|gb|EEE93085.1|
predicted protein [Populus trichocarpa]
Length = 590
Score = 87.0 bits (214), Expect = 1e-15
Identities = 37/78 (47%), Positives = 54/78 (69%)
Frame = -1
Query: 237 CKDYKVREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPDS 58
CK ++ E +LF M+H+G+TPD++ YNTL+ G C G+ +E +LF M NG LPD
Sbjct: 386 CKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDL 445
Query: 57 FTFNALIEAFCKEGMVGK 4
FT++ L++ FCKEG +GK
Sbjct: 446 FTYSMLLDGFCKEGYLGK 463
Score = 76.3 bits (186), Expect = 2e-12
Identities = 35/79 (44%), Positives = 50/79 (63%)
Frame = -1
Query: 240 LCKDYKVREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPD 61
LCKD V E +++F M + I+PD YN+L+ G C +WKE L +EM+ I+P+
Sbjct: 245 LCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPN 304
Query: 60 SFTFNALIEAFCKEGMVGK 4
FTFN L++A CKEG V +
Sbjct: 305 IFTFNVLVDAICKEGKVSE 323
Score = 61.2 bits (147), Expect = 8e-08
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = -1
Query: 240 LCKDYKVREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPD 61
+CK+ KV E +F +M G+ PD + Y++L+ G+ + E LFD M G PD
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPD 374
Query: 60 SFTFNALIEAFCK 22
+F++N LI+ +CK
Sbjct: 375 AFSYNILIKGYCK 387
Score = 55.8 bits (133), Expect = 3e-06
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = -1
Query: 225 KVREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPDSFTFN 46
++ E +LF +M+ +G PD YN L+ G+C + + E LF+EM G+ PD+ +N
Sbjct: 355 EIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYN 414
Query: 45 ALIEAFCKEG 16
LI C+ G
Sbjct: 415 TLIHGLCQLG 424
>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 85.1 bits (209), Expect = 5e-15
Identities = 37/79 (46%), Positives = 52/79 (65%)
Frame = -1
Query: 240 LCKDYKVREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPD 61
LCKD ++ E + LF M+ +GI+P++ Y++L+ G C G WKE + LF M I+PD
Sbjct: 204 LCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPD 263
Query: 60 SFTFNALIEAFCKEGMVGK 4
TFN L++A CKEGMV K
Sbjct: 264 QLTFNTLVDALCKEGMVVK 282
Score = 57.4 bits (137), Expect = 1e-06
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = -1
Query: 237 CKDYKVREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPDS 58
C ++ + + +F +MV +G P I Y TL+ G+C + + LF+EMS+ G++PD+
Sbjct: 310 CLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDT 369
Query: 57 FTFNALIEAFCKEG 16
T+N LI C G
Sbjct: 370 VTYNTLIHGLCHVG 383
Score = 57.4 bits (137), Expect = 1e-06
Identities = 27/72 (37%), Positives = 40/72 (55%)
Frame = -1
Query: 237 CKDYKVREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPDS 58
CK + + M LF M +G+ PD + YNTL+ G C G+ ++ + LF EM G +PD
Sbjct: 345 CKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDL 404
Query: 57 FTFNALIEAFCK 22
T+ L + CK
Sbjct: 405 VTYRILFDYLCK 416
>ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 84.0 bits (206), Expect = 1e-14
Identities = 37/79 (46%), Positives = 50/79 (63%)
Frame = -1
Query: 240 LCKDYKVREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPD 61
LCKD V E + LF M +GI PD + YN+L+ G C G+WKE L M R GI+P+
Sbjct: 222 LCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPN 281
Query: 60 SFTFNALIEAFCKEGMVGK 4
TFN L++ FCK+GM+ +
Sbjct: 282 VQTFNVLVDNFCKDGMISR 300
Score = 58.5 bits (140), Expect = 5e-07
Identities = 25/78 (32%), Positives = 42/78 (53%)
Frame = -1
Query: 237 CKDYKVREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPDS 58
CKD + + MVH G+ PD + YN+++ G C Q + + +F+ M G LP+
Sbjct: 293 CKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNL 352
Query: 57 FTFNALIEAFCKEGMVGK 4
T+++LI +CK + K
Sbjct: 353 VTYSSLIHGWCKTKNINK 370
>emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 84.0 bits (206), Expect = 1e-14
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = -1
Query: 240 LCKDYKVREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPD 61
LCKD ++ E + LF M+ +GI+P++ Y++L+ G C G WKE + LF M I+PD
Sbjct: 125 LCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPD 184
Query: 60 SFTFNALIEAFCKEGMV 10
TFN L++A CKEGM+
Sbjct: 185 QLTFNTLVDALCKEGMI 201
Score = 65.5 bits (158), Expect = 4e-09
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = -1
Query: 240 LCKDYKVREGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGILPD 61
LC + K+ E ++LF M EG PD + Y TL+ G C Q E L+LF +M GI P+
Sbjct: 90 LCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPN 149
Query: 60 SFTFNALIEAFC 25
+FT+++LI C
Sbjct: 150 NFTYSSLIHGLC 161
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = -1
Query: 240 LCKDYKVR---EGMELFLSMVHEGITPDDIVYNTLVLGFCCSGQWKEGLNLFDEMSRNGI 70
LCK+ ++ + M LF M +G+ PD + YNTL+ G C G+ ++ + LF EM G
Sbjct: 195 LCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQ 254
Query: 69 LPDSFTFNALIEAFCK 22
+PD T+ L + CK
Sbjct: 255 IPDLVTYRILFDYLCK 270