BLASTX nr result
ID: Coptis21_contig00029758
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00029758 (288 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN59788.1| hypothetical protein VITISV_012480 [Vitis vinifera] 166 2e-39 ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil dom... 165 3e-39 ref|XP_003603726.1| Transmembrane and coiled-coil domain-contain... 159 2e-37 ref|XP_003527670.1| PREDICTED: transmembrane and coiled-coil dom... 155 3e-36 ref|XP_003629357.1| Transmembrane and coiled-coil domain-contain... 155 4e-36 >emb|CAN59788.1| hypothetical protein VITISV_012480 [Vitis vinifera] Length = 670 Score = 166 bits (419), Expect = 2e-39 Identities = 81/95 (85%), Positives = 87/95 (91%) Frame = -3 Query: 286 DKAGKLLAEVLSKGLQGNRPVTLIGFSLGARVIFKCLQCLAQMDDNAGVVERVVLLGAPV 107 DKAGKLLAEVL KGLQGNRPVTLIG+SLGARVIFKCLQ LA+ + NA +VERVVLLGAP+ Sbjct: 532 DKAGKLLAEVLQKGLQGNRPVTLIGYSLGARVIFKCLQYLAETEQNAELVERVVLLGAPI 591 Query: 106 SFADENWEIARKMVAGRFVNVFSANDWTLGVAFRA 2 SF DENWE+ARKMVAGRFVN FS NDWTLGVAFRA Sbjct: 592 SFRDENWEVARKMVAGRFVNAFSTNDWTLGVAFRA 626 >ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil domain-containing protein 4 [Vitis vinifera] gi|297735050|emb|CBI17412.3| unnamed protein product [Vitis vinifera] Length = 662 Score = 165 bits (418), Expect = 3e-39 Identities = 80/95 (84%), Positives = 87/95 (91%) Frame = -3 Query: 286 DKAGKLLAEVLSKGLQGNRPVTLIGFSLGARVIFKCLQCLAQMDDNAGVVERVVLLGAPV 107 DKAGKLLAEVL KGLQGNRPVTL+G+SLGARVIFKCLQ LA+ + NA +VERVVLLGAP+ Sbjct: 506 DKAGKLLAEVLQKGLQGNRPVTLVGYSLGARVIFKCLQYLAETEQNAELVERVVLLGAPI 565 Query: 106 SFADENWEIARKMVAGRFVNVFSANDWTLGVAFRA 2 SF DENWE+ARKMVAGRFVN FS NDWTLGVAFRA Sbjct: 566 SFRDENWEVARKMVAGRFVNAFSTNDWTLGVAFRA 600 >ref|XP_003603726.1| Transmembrane and coiled-coil domain-containing protein [Medicago truncatula] gi|355492774|gb|AES73977.1| Transmembrane and coiled-coil domain-containing protein [Medicago truncatula] Length = 663 Score = 159 bits (402), Expect = 2e-37 Identities = 77/96 (80%), Positives = 85/96 (88%), Gaps = 1/96 (1%) Frame = -3 Query: 286 DKAGKLLAEVLSKGLQGNRPVTLIGFSLGARVIFKCLQCLAQMD-DNAGVVERVVLLGAP 110 +KAGK+LAEVL KGLQGNRP TL+GFSLGARVIFKCLQCLA DNAG+VERVVLLGAP Sbjct: 500 EKAGKVLAEVLLKGLQGNRPATLVGFSLGARVIFKCLQCLADSKGDNAGLVERVVLLGAP 559 Query: 109 VSFADENWEIARKMVAGRFVNVFSANDWTLGVAFRA 2 +S DENWE+ARKMVAGRFVN +S NDWTLG+ FRA Sbjct: 560 ISIKDENWEVARKMVAGRFVNAYSTNDWTLGITFRA 595 >ref|XP_003527670.1| PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like [Glycine max] Length = 630 Score = 155 bits (392), Expect = 3e-36 Identities = 74/96 (77%), Positives = 85/96 (88%), Gaps = 1/96 (1%) Frame = -3 Query: 286 DKAGKLLAEVLSKGLQGNRPVTLIGFSLGARVIFKCLQCLAQMD-DNAGVVERVVLLGAP 110 D+AGK+LAEVL GLQGNRPVTL+GFSLGARVIFKCLQCL++ DNAG+VERVV LGAP Sbjct: 470 DRAGKVLAEVLLHGLQGNRPVTLVGFSLGARVIFKCLQCLSESKGDNAGIVERVVFLGAP 529 Query: 109 VSFADENWEIARKMVAGRFVNVFSANDWTLGVAFRA 2 +S +ENWE ARKMVAGRFVN +S+NDWTLG+ FRA Sbjct: 530 ISIGEENWEAARKMVAGRFVNAYSSNDWTLGITFRA 565 >ref|XP_003629357.1| Transmembrane and coiled-coil domain-containing protein [Medicago truncatula] gi|355523379|gb|AET03833.1| Transmembrane and coiled-coil domain-containing protein [Medicago truncatula] Length = 359 Score = 155 bits (391), Expect = 4e-36 Identities = 75/95 (78%), Positives = 84/95 (88%) Frame = -3 Query: 286 DKAGKLLAEVLSKGLQGNRPVTLIGFSLGARVIFKCLQCLAQMDDNAGVVERVVLLGAPV 107 +KAGKLLAEVL KGLQGNRPVTL+G+SLGARVIF CLQCLA+ ++ A +VERVVLLGAP+ Sbjct: 144 NKAGKLLAEVLLKGLQGNRPVTLVGYSLGARVIFSCLQCLAKTENGAELVERVVLLGAPI 203 Query: 106 SFADENWEIARKMVAGRFVNVFSANDWTLGVAFRA 2 S DENWE ARKMVAGRFVN +S NDW LGVAFRA Sbjct: 204 SIRDENWEAARKMVAGRFVNAYSRNDWILGVAFRA 238