BLASTX nr result

ID: Coptis21_contig00029724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029724
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68112.1| hypothetical protein VITISV_040983 [Vitis vinifera]    55   6e-06

>emb|CAN68112.1| hypothetical protein VITISV_040983 [Vitis vinifera]
          Length = 939

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
 Frame = +3

Query: 45   YKDMK-GAFSVKSFY*PCWLRNIPQWCLRRMKESLIFHYKWN-CIPHKVGFFCWGAYLGR 218
            +K+ K G FSVKS Y     R+  Q+ +  +         WN C+P KVGFF W A+ G+
Sbjct: 747  WKETKDGIFSVKSLYSILDSRSGVQFPINII---------WNPCVPTKVGFFAWEAFWGK 797

Query: 219  IQTIE----RGINFPNVCVYCSVLEEDVDHLILKC 311
            + T++    RG    N C  C   EE +DH++++C
Sbjct: 798  VLTLDQLKKRGRCLANRCFLCCEEEESIDHILIQC 832


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