BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029721
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...    94   2e-17
gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pach...    93   2e-17
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...    93   3e-17
ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 4...    92   6e-17
gb|AAA33396.1| light-harvesting chlorophyll a/b protein precurso...    91   1e-16

>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/52 (82%), Positives = 49/52 (94%), Gaps = 1/52 (1%)
 Frame = +1

Query: 112 GKAVKIAPAASDLLGEGRITMRKTGGRPKPVSS-SQWYGPDRVKYLGPFSGE 264
           G+A+K+AP++SDLLGEGR+TMRKT GRPKPVSS S WYGPDRVKYLGPFSGE
Sbjct: 15  GQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGE 66


>gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
           terminalis]
          Length = 267

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/52 (84%), Positives = 49/52 (94%), Gaps = 1/52 (1%)
 Frame = +1

Query: 112 GKAVKIAPAASDLLGEGRITMRKTGGRPKPVSS-SQWYGPDRVKYLGPFSGE 264
           GKAVK+AP+AS+LLG GR++MRKTGGRPKPVSS S WYGPDRVKYLGPFSGE
Sbjct: 15  GKAVKLAPSASELLGVGRVSMRKTGGRPKPVSSGSPWYGPDRVKYLGPFSGE 66


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/52 (84%), Positives = 48/52 (92%), Gaps = 1/52 (1%)
 Frame = +1

Query: 112 GKAVKIAPAASDLLGEGRITMRKTGGRPKPVSS-SQWYGPDRVKYLGPFSGE 264
           G+AVK++P ASDLLGEGRITMRKT G+PKPVSS S WYGPDRVKYLGPFSGE
Sbjct: 15  GQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGE 66


>ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
           vinifera] gi|147833686|emb|CAN73057.1| hypothetical
           protein VITISV_007597 [Vitis vinifera]
          Length = 267

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/52 (84%), Positives = 48/52 (92%), Gaps = 1/52 (1%)
 Frame = +1

Query: 112 GKAVKIAPAASDLLGEGRITMRKTGGRPKPVSS-SQWYGPDRVKYLGPFSGE 264
           GKA+K+AP+ASDLLGEGR+TMRKTGGR KPVSS S WYG DRVKYLGPFSGE
Sbjct: 15  GKALKLAPSASDLLGEGRVTMRKTGGRAKPVSSGSPWYGTDRVKYLGPFSGE 66


>gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
          Length = 266

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/52 (80%), Positives = 48/52 (92%), Gaps = 1/52 (1%)
 Frame = +1

Query: 112 GKAVKIAPAASDLLGEGRITMRKTGGRPKPVSS-SQWYGPDRVKYLGPFSGE 264
           GKAVK+APAAS++ GEGR++MRKT G+PKPVSS S WYGPDRVKYLGPFSGE
Sbjct: 14  GKAVKLAPAASEVFGEGRVSMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGE 65