BLASTX nr result

ID: Coptis21_contig00029709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029709
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28600.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002271203.1| PREDICTED: putative disease resistance prote...    65   6e-09
emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]    65   6e-09
emb|CBI21737.3| unnamed protein product [Vitis vinifera]               59   5e-07
emb|CAN81884.1| hypothetical protein VITISV_003692 [Vitis vinifera]    59   5e-07

>emb|CBI28600.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/86 (45%), Positives = 47/86 (54%)
 Frame = -2

Query: 258 LPRMMRIMTRLRHLNIKGCKSLTWMPARIGDLIELQTLPIFIVGQDAERSXXXXXXXXXX 79
           LP+ +R +  LRHLNI  C+SL  +P  IG L  LQTLPIFIVG+    S          
Sbjct: 499 LPKDLRKLIFLRHLNIYACRSLVKLPNGIGKLSSLQTLPIFIVGRGTASSIAELQGLDLH 558

Query: 78  XXXEIKHLENVKNTWEAAKIKLKEKQ 1
               IK+LENV N   A    LKEK+
Sbjct: 559 GELMIKNLENVMNKRCARAANLKEKR 584


>ref|XP_002271203.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 1179

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/86 (45%), Positives = 47/86 (54%)
 Frame = -2

Query: 258 LPRMMRIMTRLRHLNIKGCKSLTWMPARIGDLIELQTLPIFIVGQDAERSXXXXXXXXXX 79
           LP+ +R +  LRHLNI  C+SL  +P  IG L  LQTLPIFIVG+    S          
Sbjct: 634 LPKDLRKLIFLRHLNIYACRSLVKLPNGIGKLSSLQTLPIFIVGRGTASSIAELQGLDLH 693

Query: 78  XXXEIKHLENVKNTWEAAKIKLKEKQ 1
               IK+LENV N   A    LKEK+
Sbjct: 694 GELMIKNLENVMNKRCARAANLKEKR 719


>emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]
          Length = 1697

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/86 (45%), Positives = 47/86 (54%)
 Frame = -2

Query: 258 LPRMMRIMTRLRHLNIKGCKSLTWMPARIGDLIELQTLPIFIVGQDAERSXXXXXXXXXX 79
           LP+ +R +  LRHLNI  C+SL  +P  IG L  LQTLPIFIVG+    S          
Sbjct: 634 LPKDLRKLIFLRHLNIYACRSLVKLPNGIGKLSSLQTLPIFIVGRGTASSIAELQGLDLH 693

Query: 78  XXXEIKHLENVKNTWEAAKIKLKEKQ 1
               IK+LENV N   A    LKEK+
Sbjct: 694 GELMIKNLENVXNKRCARAANLKEKR 719


>emb|CBI21737.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
 Frame = -2

Query: 258 LPRMMRIMTRLRHLNIKGCKSLTWMPARIGDLIELQTLPIFIVGQDAERS--------XX 103
           LP+  R +  LRHL   GC +LT MP  IG+L  LQ+LPIF+VG     S          
Sbjct: 349 LPKDTRELVHLRHLENDGCANLTHMPCGIGELTSLQSLPIFVVGNRRGYSRDRKIGGLNE 408

Query: 102 XXXXXXXXXXXEIKHLENVKNTWEAAKIKLKEKQ 1
                       IK+LENV N  E+++ KL +KQ
Sbjct: 409 LEKLDYLRGQLRIKNLENVWNAEESSEAKLAKKQ 442


>emb|CAN81884.1| hypothetical protein VITISV_003692 [Vitis vinifera]
          Length = 1077

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
 Frame = -2

Query: 258 LPRMMRIMTRLRHLNIKGCKSLTWMPARIGDLIELQTLPIFIVGQDAERS--------XX 103
           LP+  R +  LRHL   GC +LT MP  IG+L  LQ+LPIF+VG     S          
Sbjct: 628 LPKDTRELVHLRHLENDGCANLTHMPCGIGELTSLQSLPIFVVGNRRGYSRDRKIGGLNE 687

Query: 102 XXXXXXXXXXXEIKHLENVKNTWEAAKIKLKEKQ 1
                       IK+LENV N  E+++ KL +KQ
Sbjct: 688 LEKLDYLRGQLRIKNLENVWNAEESSEAKLAKKQ 721


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