BLASTX nr result

ID: Coptis21_contig00029704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029704
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37642.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002272977.1| PREDICTED: uncharacterized protein LOC100260...    88   6e-16
ref|XP_003538912.1| PREDICTED: uncharacterized protein LOC100779...    77   2e-12
ref|XP_002521722.1| conserved hypothetical protein [Ricinus comm...    75   5e-12
ref|XP_002306431.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11

>emb|CBI37642.3| unnamed protein product [Vitis vinifera]
          Length = 763

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/79 (54%), Positives = 52/79 (65%)
 Frame = +1

Query: 4   RYRFTFKGKLFGRKIQSVEESWGNESESMNDIMSGPTVMTNIGSAQENSTEXXXXXXXXX 183
           +Y FTF+G+LFGRKIQS  ES G E + M DIMSGPTV+ N+G   ENSTE         
Sbjct: 446 KYSFTFRGRLFGRKIQSAVESCGIEHDPMKDIMSGPTVIMNLGDRHENSTEVPPSPASVC 505

Query: 184 XXXHEEFYRTTEYHSPIST 240
              HEEF+R  +Y SP+ST
Sbjct: 506 SSAHEEFFRPGDYVSPVST 524


>ref|XP_002272977.1| PREDICTED: uncharacterized protein LOC100260782 [Vitis vinifera]
          Length = 872

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/79 (54%), Positives = 52/79 (65%)
 Frame = +1

Query: 4   RYRFTFKGKLFGRKIQSVEESWGNESESMNDIMSGPTVMTNIGSAQENSTEXXXXXXXXX 183
           +Y FTF+G+LFGRKIQS  ES G E + M DIMSGPTV+ N+G   ENSTE         
Sbjct: 560 KYSFTFRGRLFGRKIQSAVESCGIEHDPMKDIMSGPTVIMNLGDRHENSTEVPPSPASVC 619

Query: 184 XXXHEEFYRTTEYHSPIST 240
              HEEF+R  +Y SP+ST
Sbjct: 620 SSAHEEFFRPGDYVSPVST 638


>ref|XP_003538912.1| PREDICTED: uncharacterized protein LOC100779720 [Glycine max]
          Length = 734

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = +1

Query: 4   RYRFTFKGKLFGRKIQSVEESWGNE-SESMNDIMSGPTVMTNIGSAQENSTEXXXXXXXX 180
           RY    +G+LFGR++QS+ ES GNE    + D+ SGPTV+ N G   ENSTE        
Sbjct: 422 RYNLALRGRLFGRRVQSMVESHGNEFGPFVRDVTSGPTVLMNCGVRHENSTEVPPSPASV 481

Query: 181 XXXXHEEFYRTTEYHSPIST 240
               HE+F+R TEY SPIST
Sbjct: 482 CSSVHEDFWRQTEYLSPIST 501


>ref|XP_002521722.1| conserved hypothetical protein [Ricinus communis]
           gi|223539113|gb|EEF40709.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 866

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 36/79 (45%), Positives = 47/79 (59%)
 Frame = +1

Query: 4   RYRFTFKGKLFGRKIQSVEESWGNESESMNDIMSGPTVMTNIGSAQENSTEXXXXXXXXX 183
           RY  T +G+LFGRK+ S+ E  G E + + DIMSGPTV+ N+    ENSTE         
Sbjct: 560 RYSLTLRGRLFGRKLHSMVEPHGTEQDFIKDIMSGPTVIRNLSERHENSTEVPPSPASVC 619

Query: 184 XXXHEEFYRTTEYHSPIST 240
               EEF+R  +Y SP+ST
Sbjct: 620 SSAQEEFWRPVDYLSPVST 638


>ref|XP_002306431.1| predicted protein [Populus trichocarpa] gi|222855880|gb|EEE93427.1|
           predicted protein [Populus trichocarpa]
          Length = 898

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
 Frame = +1

Query: 4   RYRFTFKGKLFGRKIQSVEESWGNESESMNDIMSGPTVMTNIG--SAQENSTEXXXXXXX 177
           RY F+ +G+LFG+KIQS+ ES   E E + DIM+GPTV+ N G  +  ENSTE       
Sbjct: 582 RYSFSLRGRLFGKKIQSMMESHNAEQELVKDIMNGPTVIRNFGERNIMENSTEVPPSPAS 641

Query: 178 XXXXXHEEFYRTTEYHSPIST 240
                 EEF+R T+Y SP ST
Sbjct: 642 VCSSAQEEFWRATDYLSPAST 662


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