BLASTX nr result
ID: Coptis21_contig00029697
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00029697 (293 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containi... 174 7e-42 ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containi... 169 2e-40 ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containi... 169 2e-40 ref|XP_003594555.1| Pentatricopeptide repeat-containing protein ... 167 6e-40 ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containi... 161 5e-38 >ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710 [Vitis vinifera] Length = 990 Score = 174 bits (441), Expect = 7e-42 Identities = 80/97 (82%), Positives = 92/97 (94%) Frame = -3 Query: 291 KNGCQPNEFTYSVILNVLVVEGQLGKLDEVIDVSKKYINKSIYAYLVKTLSKLGHANEAH 112 +N C+PN FT+SVILNVLV EGQLG+LDEV++VS K++NKSIYAYLV+TLSKLGHA+EAH Sbjct: 175 ENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAH 234 Query: 111 RLFCNMWSFHDKGDRDAYMSMLESLCDAGRTAEALDL 1 RLFCNMWSFHD+GDRDAYMSMLESLCDAG+T EALDL Sbjct: 235 RLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDL 271 >ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965, mitochondrial-like [Cucumis sativus] Length = 685 Score = 169 bits (429), Expect = 2e-40 Identities = 77/97 (79%), Positives = 90/97 (92%) Frame = -3 Query: 291 KNGCQPNEFTYSVILNVLVVEGQLGKLDEVIDVSKKYINKSIYAYLVKTLSKLGHANEAH 112 KN C+PNEFTYS+ILNVLV EGQLG+LDEV++VS K+INKSIYAYLV+TLSKLGH++EAH Sbjct: 367 KNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAH 426 Query: 111 RLFCNMWSFHDKGDRDAYMSMLESLCDAGRTAEALDL 1 RLFCNMWSFHD GDRDAY+SMLESLC G+T EA++L Sbjct: 427 RLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIEL 463 >ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965, mitochondrial-like [Cucumis sativus] Length = 690 Score = 169 bits (429), Expect = 2e-40 Identities = 77/97 (79%), Positives = 90/97 (92%) Frame = -3 Query: 291 KNGCQPNEFTYSVILNVLVVEGQLGKLDEVIDVSKKYINKSIYAYLVKTLSKLGHANEAH 112 KN C+PNEFTYS+ILNVLV EGQLG+LDEV++VS K+INKSIYAYLV+TLSKLGH++EAH Sbjct: 372 KNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAH 431 Query: 111 RLFCNMWSFHDKGDRDAYMSMLESLCDAGRTAEALDL 1 RLFCNMWSFHD GDRDAY+SMLESLC G+T EA++L Sbjct: 432 RLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIEL 468 >ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 639 Score = 167 bits (424), Expect = 6e-40 Identities = 74/97 (76%), Positives = 89/97 (91%) Frame = -3 Query: 291 KNGCQPNEFTYSVILNVLVVEGQLGKLDEVIDVSKKYINKSIYAYLVKTLSKLGHANEAH 112 +NGCQPNEFTYSV+LNVLV EGQL KLD ++++SKKY+NK IYAY V+TLSKLGH++EAH Sbjct: 321 ENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAH 380 Query: 111 RLFCNMWSFHDKGDRDAYMSMLESLCDAGRTAEALDL 1 RLFCNMW+ HDKGD+DAYMSMLESLC +G+ AEA+DL Sbjct: 381 RLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDL 417 >ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965, mitochondrial-like [Glycine max] Length = 647 Score = 161 bits (408), Expect = 5e-38 Identities = 73/97 (75%), Positives = 86/97 (88%) Frame = -3 Query: 291 KNGCQPNEFTYSVILNVLVVEGQLGKLDEVIDVSKKYINKSIYAYLVKTLSKLGHANEAH 112 +N QPNEFTYSVILN+LV EG+L KLD ++D+SKKYINK IYAY V+TLSK+GHA+EAH Sbjct: 329 ENDIQPNEFTYSVILNLLVAEGKLNKLDNIVDISKKYINKQIYAYFVRTLSKVGHASEAH 388 Query: 111 RLFCNMWSFHDKGDRDAYMSMLESLCDAGRTAEALDL 1 RLFCNMW+FHDKGD+DA MSMLESLC AG+ EA+DL Sbjct: 389 RLFCNMWNFHDKGDKDACMSMLESLCSAGKMTEAIDL 425