BLASTX nr result

ID: Coptis21_contig00029658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029658
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35147.3| unnamed protein product [Vitis vinifera]               70   2e-10
emb|CBI35149.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002466888.1| hypothetical protein SORBIDRAFT_01g015900 [S...    69   6e-10
ref|XP_002269779.2| PREDICTED: putative disease resistance prote...    67   1e-09
emb|CAN60801.1| hypothetical protein VITISV_022857 [Vitis vinifera]    67   1e-09

>emb|CBI35147.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 41/110 (37%), Positives = 60/110 (54%)
 Frame = -3

Query: 546 MPSVKYVDDSFCGAGLVRAFPSLEILAFDNMTSFLRWDGLEEGDIPRLRTLTISSCLKLT 367
           M  ++ +   FCG G +R FPSLE +  ++M +   W  +E+GD PRL  LTI +     
Sbjct: 469 MSELESISCEFCGEGQIRGFPSLEKMKLEDMKNLKEWHEIEDGDFPRLHELTIKNSPNFA 528

Query: 366 SLPKIQYFRSLEHLEISDCSQLPVLPKEAVPVSLSSLIINSCPYLRRWYE 217
           SLPK   F SL  L + +C+++ +L       SL  L I+ CP L+R  E
Sbjct: 529 SLPK---FPSLCDLVLDECNEM-ILGSNL--SSLEELSISKCPKLKRCEE 572


>emb|CBI35149.3| unnamed protein product [Vitis vinifera]
          Length = 378

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 41/105 (39%), Positives = 58/105 (55%)
 Frame = -3

Query: 546 MPSVKYVDDSFCGAGLVRAFPSLEILAFDNMTSFLRWDGLEEGDIPRLRTLTISSCLKLT 367
           M  ++ +   FCG G +R FPSLE +  ++M +   W  +EEGD PRL  LTI +     
Sbjct: 177 MSELESISCEFCGEGQIRGFPSLEKMKLEDMKNLKEWHEIEEGDFPRLHELTIKNSPNFA 236

Query: 366 SLPKIQYFRSLEHLEISDCSQLPVLPKEAVPVSLSSLIINSCPYL 232
           SLPK   F SL  L + +C+++ +L  +   VSL    I SCP L
Sbjct: 237 SLPK---FPSLCDLVLDECNEM-ILGSDL--VSLQRFEILSCPKL 275


>ref|XP_002466888.1| hypothetical protein SORBIDRAFT_01g015900 [Sorghum bicolor]
            gi|241920742|gb|EER93886.1| hypothetical protein
            SORBIDRAFT_01g015900 [Sorghum bicolor]
          Length = 1097

 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 38/99 (38%), Positives = 58/99 (58%)
 Frame = -3

Query: 546  MPSVKYVDDSFCGAGLVRAFPSLEILAFDNMTSFLRWDGLEEGDIPRLRTLTISSCLKLT 367
            M  V+++   FCG G  + FPSL+ L F+NM +++ W G+++GD   L  L I  C +L 
Sbjct: 851  MRGVRHISKEFCGQGDTKGFPSLKDLEFENMPTWVEWSGVDDGDFSCLHELRIKECFELR 910

Query: 366  SLPKIQYFRSLEHLEISDCSQLPVLPKEAVPVSLSSLII 250
             LP+     SL  L I +C +L  LP   +P +LSSL++
Sbjct: 911  HLPR-PLSASLSKLVIKNCDKLVRLPH--LP-NLSSLVL 945


>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 1091

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/101 (38%), Positives = 57/101 (56%)
 Frame = -3

Query: 546  MPSVKYVDDSFCGAGLVRAFPSLEILAFDNMTSFLRWDGLEEGDIPRLRTLTISSCLKLT 367
            M  ++ +   FCG G +R FPSLE +  ++M +   W  +EEGD PRL  LTI +     
Sbjct: 798  MSELESISCEFCGEGQIRGFPSLEKMKLEDMKNLKEWHEIEEGDFPRLHELTIKNSPNFA 857

Query: 366  SLPKIQYFRSLEHLEISDCSQLPVLPKEAVPVSLSSLIINS 244
            SLPK   F SL  L + +C+++ +L       SLSSL I++
Sbjct: 858  SLPK---FPSLCDLVLDECNEM-ILGSVQFLSSLSSLKISN 894


>emb|CAN60801.1| hypothetical protein VITISV_022857 [Vitis vinifera]
          Length = 951

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/101 (38%), Positives = 57/101 (56%)
 Frame = -3

Query: 546 MPSVKYVDDSFCGAGLVRAFPSLEILAFDNMTSFLRWDGLEEGDIPRLRTLTISSCLKLT 367
           M  ++ +   FCG G +R FPSLE +  ++M +   W  +EEGD PRL  LTI +     
Sbjct: 658 MSELESISCEFCGEGQIRGFPSLEKMKLEDMKNLKEWHEIEEGDFPRLHELTIKNSPNFA 717

Query: 366 SLPKIQYFRSLEHLEISDCSQLPVLPKEAVPVSLSSLIINS 244
           SLPK   F SL  L + +C+++ +L       SLSSL I++
Sbjct: 718 SLPK---FPSLCDLVLDECNEM-ILGSVQFLSSLSSLKISN 754


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