BLASTX nr result

ID: Coptis21_contig00029648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029648
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313946.1| predicted protein [Populus trichocarpa] gi|2...   303   3e-80
ref|XP_002268574.2| PREDICTED: uncharacterized protein LOC100260...   300   2e-79
emb|CBI25071.3| unnamed protein product [Vitis vinifera]              300   2e-79
ref|XP_002522036.1| conserved hypothetical protein [Ricinus comm...   298   1e-78
ref|NP_201256.2| uncharacterized protein [Arabidopsis thaliana] ...   290   2e-76

>ref|XP_002313946.1| predicted protein [Populus trichocarpa] gi|222850354|gb|EEE87901.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  303 bits (776), Expect = 3e-80
 Identities = 165/237 (69%), Positives = 187/237 (78%), Gaps = 14/237 (5%)
 Frame = +1

Query: 79  IMSNQRKFFPIFLIFLTV------FXXXXXNALTNSKPISDLKEAIVKGLGFGIEDVKIS 240
           I S+ R    I LIF T+      F     N+  + K ISDLKEAIVKGLGF  ++ KIS
Sbjct: 3   IKSSCRYLTLISLIFTTLSFTAALFSAPDINSPPHPKAISDLKEAIVKGLGFQADEFKIS 62

Query: 241 GFDIRDALVGRSVAYEFDIEVDNKVMPFKLIEDVSRWEYVDLPIFRSE-------ENGLV 399
           GFD+RDALVG SVAYEFD+EVDNKV PFKL+EDV+RWE+VDLPIFR E       ENGLV
Sbjct: 63  GFDLRDALVGHSVAYEFDVEVDNKVFPFKLLEDVNRWEFVDLPIFRVEDPIRPGDENGLV 122

Query: 400 EREIKEVG-PVLAPFQLAGPMELWIQDGKDMRVSLPHDVDAGVLKKVILADGAVVTVKGA 576
           E++  + G PVLAPFQLAGPME+WIQD KDMR+SLPHDVDAGVLKKVILADGAVVTVKGA
Sbjct: 123 EQKKDDNGSPVLAPFQLAGPMEIWIQDAKDMRISLPHDVDAGVLKKVILADGAVVTVKGA 182

Query: 577 RSVSLRHPLDLPLPLNGSSNGLASGLLTLAEHLRLASHTEGGPLVSLRIVGPTSLTS 747
           RSVSLRHP+DLPLPLN + +G ASGLL LAE LR A+H+E  P +SLRIVGPTSLTS
Sbjct: 183 RSVSLRHPVDLPLPLNRTQSGFASGLLALAEQLRRATHSEEAPPLSLRIVGPTSLTS 239


>ref|XP_002268574.2| PREDICTED: uncharacterized protein LOC100260026 [Vitis vinifera]
          Length = 444

 Score =  300 bits (768), Expect = 2e-79
 Identities = 156/222 (70%), Positives = 181/222 (81%), Gaps = 10/222 (4%)
 Frame = +1

Query: 112 FLIFLTVFXXXXXNALTNS-------KPISDLKEAIVKGLGFGIEDVKISGFDIRDALVG 270
           FL+ L VF       +++        K  SDLK+AIVKGLGF  ED+K+SGFD+RDALVG
Sbjct: 9   FLLSLMVFSSSTKALISSQDFNPPSPKAFSDLKDAIVKGLGFQSEDLKVSGFDLRDALVG 68

Query: 271 RSVAYEFDIEVDNKVMPFKLIEDVSRWEYVDLPIFRSE---ENGLVEREIKEVGPVLAPF 441
            SVAYEF++E+DNKV+P KL+EDV+RWEYVDLPIFR +   ENGLV R+ ++  PVLAPF
Sbjct: 69  HSVAYEFNVEIDNKVLPIKLLEDVNRWEYVDLPIFRVDQDNENGLVPRKSEKRLPVLAPF 128

Query: 442 QLAGPMELWIQDGKDMRVSLPHDVDAGVLKKVILADGAVVTVKGARSVSLRHPLDLPLPL 621
           QLAGPMELWIQD KDMR+SLPHDVDAG LKKVILADGAVVTVKGARSVSLRHP+DLPLP 
Sbjct: 129 QLAGPMELWIQDAKDMRISLPHDVDAGELKKVILADGAVVTVKGARSVSLRHPIDLPLPF 188

Query: 622 NGSSNGLASGLLTLAEHLRLASHTEGGPLVSLRIVGPTSLTS 747
           N S+NG ASG+L LAE LR A+ T+G PL+SLRIVGPTSLTS
Sbjct: 189 NRSNNGFASGILALAERLRHAARTQGEPLLSLRIVGPTSLTS 230


>emb|CBI25071.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  300 bits (768), Expect = 2e-79
 Identities = 156/222 (70%), Positives = 181/222 (81%), Gaps = 10/222 (4%)
 Frame = +1

Query: 112 FLIFLTVFXXXXXNALTNS-------KPISDLKEAIVKGLGFGIEDVKISGFDIRDALVG 270
           FL+ L VF       +++        K  SDLK+AIVKGLGF  ED+K+SGFD+RDALVG
Sbjct: 65  FLLSLMVFSSSTKALISSQDFNPPSPKAFSDLKDAIVKGLGFQSEDLKVSGFDLRDALVG 124

Query: 271 RSVAYEFDIEVDNKVMPFKLIEDVSRWEYVDLPIFRSE---ENGLVEREIKEVGPVLAPF 441
            SVAYEF++E+DNKV+P KL+EDV+RWEYVDLPIFR +   ENGLV R+ ++  PVLAPF
Sbjct: 125 HSVAYEFNVEIDNKVLPIKLLEDVNRWEYVDLPIFRVDQDNENGLVPRKSEKRLPVLAPF 184

Query: 442 QLAGPMELWIQDGKDMRVSLPHDVDAGVLKKVILADGAVVTVKGARSVSLRHPLDLPLPL 621
           QLAGPMELWIQD KDMR+SLPHDVDAG LKKVILADGAVVTVKGARSVSLRHP+DLPLP 
Sbjct: 185 QLAGPMELWIQDAKDMRISLPHDVDAGELKKVILADGAVVTVKGARSVSLRHPIDLPLPF 244

Query: 622 NGSSNGLASGLLTLAEHLRLASHTEGGPLVSLRIVGPTSLTS 747
           N S+NG ASG+L LAE LR A+ T+G PL+SLRIVGPTSLTS
Sbjct: 245 NRSNNGFASGILALAERLRHAARTQGEPLLSLRIVGPTSLTS 286


>ref|XP_002522036.1| conserved hypothetical protein [Ricinus communis]
           gi|223538635|gb|EEF40236.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score =  298 bits (762), Expect = 1e-78
 Identities = 160/240 (66%), Positives = 186/240 (77%), Gaps = 18/240 (7%)
 Frame = +1

Query: 82  MSNQRKFFPIFLIFLTVFXXXXXNALTNS------KPISDLKEAIVKGLGFGIEDVKISG 243
           M++   F  IF++F T+      ++L +S      + ISDLKEAIVKGLGF  +D KI+G
Sbjct: 1   MASNLYFTLIFILFTTLPSSSSSSSLLSSPSINPPRAISDLKEAIVKGLGFQADDFKITG 60

Query: 244 FDIRDALVGRSVAYEFDIEVDNKVMPFKLIEDVSRWEYVDLPIFRSEE----------NG 393
           FDIRDALVG +VAYEFD+EVDN+V+PFKL+EDV+RWEYVDLPIFR EE          N 
Sbjct: 61  FDIRDALVGHAVAYEFDLEVDNQVLPFKLLEDVNRWEYVDLPIFRVEEEEGSVRVGDENT 120

Query: 394 LVEREIKEVG--PVLAPFQLAGPMELWIQDGKDMRVSLPHDVDAGVLKKVILADGAVVTV 567
           LVE++ K     PVLAPFQLAGPME+W+QD K+MR+SLPHDVDAGVLKKVILADGA VTV
Sbjct: 121 LVEKKGKSDNGLPVLAPFQLAGPMEIWVQDAKNMRISLPHDVDAGVLKKVILADGAAVTV 180

Query: 568 KGARSVSLRHPLDLPLPLNGSSNGLASGLLTLAEHLRLASHTEGGPLVSLRIVGPTSLTS 747
           KGARSVSLRHP+DLPLP N + NG ASGLL LAE LR AS TEG PL+SLRIV PTSLTS
Sbjct: 181 KGARSVSLRHPIDLPLPFNRTQNGFASGLLALAEQLRRASRTEGAPLLSLRIVAPTSLTS 240


>ref|NP_201256.2| uncharacterized protein [Arabidopsis thaliana]
           gi|28393303|gb|AAO42078.1| unknown protein [Arabidopsis
           thaliana] gi|28827700|gb|AAO50694.1| unknown protein
           [Arabidopsis thaliana] gi|332010526|gb|AED97909.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 424

 Score =  290 bits (743), Expect = 2e-76
 Identities = 159/229 (69%), Positives = 183/229 (79%), Gaps = 16/229 (6%)
 Frame = +1

Query: 109 IFLIFLTVFXXXXXNALTNS--------KPISDLKEAIVKGLGFGIEDVKISGFDIRDAL 264
           +FLI  T+F     +AL +S        K ISDLKE+IVKGLGF  E+VK+SGFDIRDAL
Sbjct: 12  LFLILFTIFPSS--SALISSPDANPPYPKAISDLKESIVKGLGFQSEEVKVSGFDIRDAL 69

Query: 265 VGRSVAYEFDIEVDNKVMPFKLIEDVSRWEYVDLPIFRSE---ENGLVEREIK-----EV 420
           VG SV+YEFD+E+DNKV+PFKL+EDV+RWEYVDLPIF+ E   ENGLV    K     +V
Sbjct: 70  VGHSVSYEFDLEIDNKVLPFKLLEDVNRWEYVDLPIFQVEQPSENGLVPMRNKKTSSDDV 129

Query: 421 GPVLAPFQLAGPMELWIQDGKDMRVSLPHDVDAGVLKKVILADGAVVTVKGARSVSLRHP 600
            PVLAPFQL+GPMELWIQD  +MR+SLP+DVDAGVLKKVILADGAVVTVKGARSVSLRHP
Sbjct: 130 LPVLAPFQLSGPMELWIQDANNMRLSLPYDVDAGVLKKVILADGAVVTVKGARSVSLRHP 189

Query: 601 LDLPLPLNGSSNGLASGLLTLAEHLRLASHTEGGPLVSLRIVGPTSLTS 747
           +DLPLPLN SSN  ASGLL+LAE LR AS  +  P++SLRIVGPTSL S
Sbjct: 190 IDLPLPLNQSSNEFASGLLSLAEQLRRASTDQESPVLSLRIVGPTSLAS 238


Top