BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029635
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550790.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27
ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago t...   119   3e-25
ref|XP_002318601.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containi...   117   7e-25
ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   114   1e-23

>ref|XP_003550790.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Glycine max]
          Length = 451

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/73 (78%), Positives = 66/73 (90%)
 Frame = +1

Query: 1   VERVSHALELFERMKKSGIGDYGSVYDLLIPKLCRGGEFEKGRLLWDEAMKMGITLQCSS 180
           VERV++ALELFE+MKKS +G YG VYD+LIPKLCRGG+FEKGR LWDEA  MGITLQCS 
Sbjct: 338 VERVNYALELFEKMKKSSMGGYGPVYDVLIPKLCRGGDFEKGRELWDEASGMGITLQCSE 397

Query: 181 DVLDPTVTEVFKP 219
           DVLDP++TEV+KP
Sbjct: 398 DVLDPSITEVYKP 410


>ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355497182|gb|AES78385.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 563

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/73 (73%), Positives = 63/73 (86%)
 Frame = +1

Query: 1   VERVSHALELFERMKKSGIGDYGSVYDLLIPKLCRGGEFEKGRLLWDEAMKMGITLQCSS 180
           VERV+HAL+LFE+MK S +G YG VYD+LIPKLCRGG+FEKGR LWDE   MGITLQCS 
Sbjct: 445 VERVNHALDLFEKMKGSSVGGYGPVYDVLIPKLCRGGDFEKGRELWDEGTYMGITLQCSK 504

Query: 181 DVLDPTVTEVFKP 219
           DVLDP++TEV+ P
Sbjct: 505 DVLDPSITEVYIP 517


>ref|XP_002318601.1| predicted protein [Populus trichocarpa] gi|222859274|gb|EEE96821.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  119 bits (297), Expect = 3e-25
 Identities = 53/73 (72%), Positives = 64/73 (87%)
 Frame = +1

Query: 1   VERVSHALELFERMKKSGIGDYGSVYDLLIPKLCRGGEFEKGRLLWDEAMKMGITLQCSS 180
           VERVS+ALELFERMK S +G YG VYD+LIPKLC+GG+FE+GR LW+EA  MG++  CSS
Sbjct: 374 VERVSYALELFERMKTSSLGGYGPVYDILIPKLCKGGDFERGRELWEEATAMGVSFSCSS 433

Query: 181 DVLDPTVTEVFKP 219
           DVLDP++TEVFKP
Sbjct: 434 DVLDPSITEVFKP 446


>ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Cucumis sativus]
           gi|449477571|ref|XP_004155060.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Cucumis sativus]
          Length = 487

 Score =  117 bits (294), Expect = 7e-25
 Identities = 51/73 (69%), Positives = 65/73 (89%)
 Frame = +1

Query: 1   VERVSHALELFERMKKSGIGDYGSVYDLLIPKLCRGGEFEKGRLLWDEAMKMGITLQCSS 180
           VER ++ALELFE+MK+S +G YG VYD+LIPKLCRGGEFE GR LW+EAM MG++L CSS
Sbjct: 381 VERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEAMAMGVSLNCSS 440

Query: 181 DVLDPTVTEVFKP 219
           ++LDP++T+VFKP
Sbjct: 441 EILDPSITKVFKP 453


>ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61370, mitochondrial-like [Vitis vinifera]
          Length = 505

 Score =  114 bits (284), Expect = 1e-23
 Identities = 50/73 (68%), Positives = 64/73 (87%)
 Frame = +1

Query: 1   VERVSHALELFERMKKSGIGDYGSVYDLLIPKLCRGGEFEKGRLLWDEAMKMGITLQCSS 180
           VERV++ALE+FERMK+S +G YG VYD+LIPKLCR G+F KGR LWDEA ++G+ L CSS
Sbjct: 371 VERVNYALEMFERMKRSSLGGYGPVYDVLIPKLCRSGDFGKGRELWDEATRVGVLLHCSS 430

Query: 181 DVLDPTVTEVFKP 219
           +VLDP++T+VFKP
Sbjct: 431 EVLDPSITKVFKP 443