BLASTX nr result

ID: Coptis21_contig00029629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029629
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24848.3| unnamed protein product [Vitis vinifera]              101   6e-20
ref|XP_002265157.2| PREDICTED: uncharacterized protein LOC100257...   100   2e-19
ref|XP_003539651.1| PREDICTED: multiple C2 and transmembrane dom...    99   4e-19
ref|XP_003534489.1| PREDICTED: multiple C2 and transmembrane dom...    99   4e-19
ref|XP_002298449.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19

>emb|CBI24848.3| unnamed protein product [Vitis vinifera]
          Length = 295

 Score =  101 bits (252), Expect = 6e-20
 Identities = 47/61 (77%), Positives = 54/61 (88%)
 Frame = -1

Query: 198 KKKIMKLVVEVVDAHDLMPKDGEGSSSPFVEVDYVNQRIRTRTVHKNLNPVWNQKLLLNL 19
           +K+ MKLVVE+VDAHDL+P+DGEGS+SPFVEVD+ NQR RT TV KNLNPVWNQKLL N 
Sbjct: 58  RKRGMKLVVEIVDAHDLLPRDGEGSASPFVEVDFENQRSRTTTVPKNLNPVWNQKLLFNF 117

Query: 18  D 16
           D
Sbjct: 118 D 118


>ref|XP_002265157.2| PREDICTED: uncharacterized protein LOC100257873 [Vitis vinifera]
          Length = 1046

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/57 (80%), Positives = 51/57 (89%)
 Frame = -1

Query: 186 MKLVVEVVDAHDLMPKDGEGSSSPFVEVDYVNQRIRTRTVHKNLNPVWNQKLLLNLD 16
           MKLVVE+VDAHDL+P+DGEGS+SPFVEVD+ NQR RT TV KNLNPVWNQKLL N D
Sbjct: 1   MKLVVEIVDAHDLLPRDGEGSASPFVEVDFENQRSRTTTVPKNLNPVWNQKLLFNFD 57


>ref|XP_003539651.1| PREDICTED: multiple C2 and transmembrane domain-containing protein
           2-like [Glycine max]
          Length = 1180

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/57 (80%), Positives = 51/57 (89%)
 Frame = -1

Query: 186 MKLVVEVVDAHDLMPKDGEGSSSPFVEVDYVNQRIRTRTVHKNLNPVWNQKLLLNLD 16
           MKLVVEV++AHDLMPKDGEGS+SPFVEVD+ NQ  RTRTV KNLNP WNQKL+ NLD
Sbjct: 1   MKLVVEVINAHDLMPKDGEGSASPFVEVDFENQLSRTRTVPKNLNPTWNQKLIFNLD 57


>ref|XP_003534489.1| PREDICTED: multiple C2 and transmembrane domain-containing protein
           2-like [Glycine max]
          Length = 1060

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/57 (80%), Positives = 51/57 (89%)
 Frame = -1

Query: 186 MKLVVEVVDAHDLMPKDGEGSSSPFVEVDYVNQRIRTRTVHKNLNPVWNQKLLLNLD 16
           MKLVVEV++AHDLMPKDGEGS+SPFVEVD+ NQ  RTRTV KNLNP WNQKL+ NLD
Sbjct: 1   MKLVVEVINAHDLMPKDGEGSASPFVEVDFENQLSRTRTVPKNLNPTWNQKLIFNLD 57


>ref|XP_002298449.1| predicted protein [Populus trichocarpa] gi|222845707|gb|EEE83254.1|
           predicted protein [Populus trichocarpa]
          Length = 1051

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/58 (75%), Positives = 53/58 (91%)
 Frame = -1

Query: 186 MKLVVEVVDAHDLMPKDGEGSSSPFVEVDYVNQRIRTRTVHKNLNPVWNQKLLLNLDD 13
           MKLVVE+VDAHDLMPKDG+GS+SPFVEVD+ NQ  +T+T+ KNLNPVWNQKLL +LD+
Sbjct: 1   MKLVVEIVDAHDLMPKDGKGSASPFVEVDFQNQLSKTKTIPKNLNPVWNQKLLFDLDE 58


Top